Click here to switch to the map view.

The map label for this gene is priB [H]

Identifier: 148827737

GI number: 148827737

Start: 1092184

End: 1092402

Strand: Reverse

Name: priB [H]

Synonym: CGSHiGG_05990

Alternate gene names: 148827737

Gene position: 1092402-1092184 (Counterclockwise)

Preceding gene: 148827738

Following gene: 148827736

Centisome position: 57.89

GC content: 35.16

Gene sequence:

>219_bases
TTGTTAGAACATCGTTCTGATCAGATTGAAAGTGGTTTCACTCGTCAAGCGTGGTTAAAAATGCCAGTTCAAATTAGTGG
TAATCAATTGATAGAAAAAACTCAAAGCATTACGGTCGGTAGTAAAATTTTGGTGGTGGGATTTATTACATCACATAAAA
CCCAAAGTGGGTTATGCCAATTAGTTTTACATGCCGAGCAAATCGAATTTATAGATTAG

Upstream 100 bases:

>100_bases
AGTAATTTGAAAATTGATAATCGTTTTTCGGTTATGGGAGTCGTTTCTCAGTTACCAAAGCGATTAAAAAAGCCCTAGTG
GAATTGAGCATTGCAAGTTT

Downstream 100 bases:

>100_bases
GAGACTAGCCAAATGGCACGTTATTTCCGTCGTCGTAAGTTCTGCCGTTTCACAGCGGAAAATGTTGTTGAAATCGATTA
CAAAGATATCGCTACATTAA

Product: primosomal replication protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MLEHRSDQIESGFTRQAWLKMPVQISGNQLIEKTQSITVGSKILVVGFITSHKTQSGLCQLVLHAEQIEFID

Sequences:

>Translated_72_residues
MLEHRSDQIESGFTRQAWLKMPVQISGNQLIEKTQSITVGSKILVVGFITSHKTQSGLCQLVLHAEQIEFID
>Mature_72_residues
MLEHRSDQIESGFTRQAWLKMPVQISGNQLIEKTQSITVGSKILVVGFITSHKTQSGLCQLVLHAEQIEFID

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS) [H]

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790645, Length=72, Percent_Identity=61.1111111111111, Blast_Score=90, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 8095; Mature: 8095

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEHRSDQIESGFTRQAWLKMPVQISGNQLIEKTQSITVGSKILVVGFITSHKTQSGLCQ
CCCCCCCCCCCCCCCCHHEECCEEECCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHH
LVLHAEQIEFID
HHHHHHHHEECC
>Mature Secondary Structure
MLEHRSDQIESGFTRQAWLKMPVQISGNQLIEKTQSITVGSKILVVGFITSHKTQSGLCQ
CCCCCCCCCCCCCCCCHHEECCEEECCCHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHH
LVLHAEQIEFID
HHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA