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The map label for this gene is pdxY

Identifier: 148827607

GI number: 148827607

Start: 949855

End: 949959

Strand: Reverse

Name: pdxY

Synonym: CGSHiGG_05200

Alternate gene names: 148827607

Gene position: 949959-949855 (Counterclockwise)

Preceding gene: 148827608

Following gene: 148827606

Centisome position: 50.34

GC content: 36.19

Gene sequence:

>105_bases
ATGAAAACCACCTTTGAACTAGGTTCTTACGAATTACAAACCATTGCCGCACGTTTTGAAATTCTCAATCCAAGCAGCAA
TTATAAAGCTGAAAAAGTTGCCTAA

Upstream 100 bases:

>100_bases
ACGTTTAATGTCTTACGGTTATTGCTAACTAACATTCTAAAAGAGCGGTGATTTTTGCCGCTCTTTTTTGATCTAAATAT
ACAACAAAGGAGAAAACACA

Downstream 100 bases:

>100_bases
TGGATTTACTTTCAGACATTGAAAAACAACTCCAAAAAGCCACCGCTCAAGCATTTCTTATCGCCTTGAGTGGTGGTTTG
GACTCCACTGTACTTCTTTC

Product: DNA mismatch repair protein

Products: NA

Alternate protein names: PM kinase

Number of amino acids: Translated: 34; Mature: 34

Protein sequence:

>34_residues
MKTTFELGSYELQTIAARFEILNPSSNYKAEKVA

Sequences:

>Translated_34_residues
MKTTFELGSYELQTIAARFEILNPSSNYKAEKVA
>Mature_34_residues
MKTTFELGSYELQTIAARFEILNPSSNYKAEKVA

Specific function: Phosphorylates B6 vitamers; functions in a salvage pathway. Uses pyridoxamine

COG id: COG2240

COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyridoxine kinase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PDXY_HAEIE (A5UA83)

Other databases:

- EMBL:   CP000671
- RefSeq:   YP_001290067.1
- ProteinModelPortal:   A5UA83
- SMR:   A5UA83
- STRING:   A5UA83
- GeneID:   5225308
- GenomeReviews:   CP000671_GR
- KEGG:   hip:CGSHiEE_00970
- eggNOG:   COG2240
- HOGENOM:   HBG661459
- OMA:   CPNQLEL
- ProtClustDB:   PRK05756
- BioCyc:   HINF374930:CGSHIEE_00970-MONOMER
- HAMAP:   MF_01639
- InterPro:   IPR013749
- InterPro:   IPR004625
- TIGRFAMs:   TIGR00687

Pfam domain/function: PF08543 Phos_pyr_kin

EC number: =2.7.1.35

Molecular weight: Translated: 3851; Mature: 3851

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: BINDING 9-9 BINDING 44-44 BINDING 224-224

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTFELGSYELQTIAARFEILNPSSNYKAEKVA
CCCCCCCCCEEHEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKTTFELGSYELQTIAARFEILNPSSNYKAEKVA
CCCCCCCCCEEHEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA