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The map label for this gene is yqaK [H]

Identifier: 148827570

GI number: 148827570

Start: 915925

End: 916845

Strand: Direct

Name: yqaK [H]

Synonym: CGSHiGG_04985

Alternate gene names: 148827570

Gene position: 915925-916845 (Clockwise)

Preceding gene: 148827569

Following gene: 148827571

Centisome position: 48.53

GC content: 40.72

Gene sequence:

>921_bases
ATGACAAACCAAGTCCAACATCAACAAAATAAACAGCCACCTGCACTTAAAACATTTTTTGAAAGTGCGAATGTGCAAAA
TAAGATTAAGGAACTTGTTGGCAAAAATGCGGCAACCTTTGCAACAAGTGTTATGCAAATTGCCAATAGCAATGCAATGC
TTAAAACAGCAGACCCAATGAGCATTTTTAACGCCGCTTGTATGGCAGCGACATTGAATTTGCCACTACAAAATGGCTTA
GGCTTTGCCTACATCGTCCCTTTCAGAAACAACAAGGAAAAGAAAACCGAAGCGCAATTCCAAATTGGCTATAAAGGCTT
TATCCAACTGGCACAACGTAGCGGGCAATTTAAACGCTTAGTCGCATTGCCTGTGTACAAAAAGCAACTTATCAAAAAAG
ATTTCATCAATGGTTTTGAGTTCGACTGGGAGCAAGAGCCTGAACAAAACGAAAATCCAATCGGCTATTACGCCTATTTT
AAACTGGTAAACGATTTTTCGGCTGAACTCTATATGAGTCACGATGACATCGTCAAACACGCTCAACGCTACAGTCAAAC
ATTTAAAAAAGGCTATGGCGTATGGCACGATAACTTCGAGGCAATGGCATTAAAAACCGTAACTAAGTTATTGCTATCAA
AACAAGCTCCACTCTCTGTTGAAATGCAACAAGCCGTATTAGCCGACCAAGCCGTTGTGAAAGATGTAGAAAATCAAGAG
TTCAACTACACCGACAATATTCAAGAAGCGGAATTTTTAGCGGTTGTTGATGAAGCCACATTCGAACAATGCAAACAAAG
CATTACCAATGGCGAAACCACCCTGCAAGAACTTTGTGATAGCGGGGCTTATGAGTTTAGCCAAGAGCAGATTGCGGAGT
TGGAGGCAATTGAGAATGGAAATGTACCAACTCAAAGCTAA

Upstream 100 bases:

>100_bases
AAGTTATGAGCCTTATAGACAAGAGGCGATTAAGAAAATCGCAGAGCGTGAATTAAACGACAGAATGAATGATTATGACC
CAGATTAATGGAGGGGCGAG

Downstream 100 bases:

>100_bases
ATGCTCTGGCTTGGCTGATTTAATGGTAAAGCCTAAAAGCGGTAATGGAATATCTGCTACAGCAAAAAGTGCGGTGAGAA
AGATAGTGAAATTTGATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTNQVQHQQNKQPPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNAMLKTADPMSIFNAACMAATLNLPLQNGL
GFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYF
KLVNDFSAELYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQE
FNYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEAIENGNVPTQS

Sequences:

>Translated_306_residues
MTNQVQHQQNKQPPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNAMLKTADPMSIFNAACMAATLNLPLQNGL
GFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYF
KLVNDFSAELYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQE
FNYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEAIENGNVPTQS
>Mature_305_residues
TNQVQHQQNKQPPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNAMLKTADPMSIFNAACMAATLNLPLQNGLG
FAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRLVALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFK
LVNDFSAELYMSHDDIVKHAQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQEF
NYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEAIENGNVPTQS

Specific function: Binds To Single-Stranded DNA And Also Promotes The Renaturation Of Complementary Single-Stranded DNA. Function In Recombination. Has A Function Similar To That Of Lambda Redb. [C]

COG id: COG3723

COG function: function code L; Recombinational DNA repair protein (RecE pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787611, Length=263, Percent_Identity=28.5171102661597, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004590
- InterPro:   IPR018330 [H]

Pfam domain/function: PF03837 RecT [H]

EC number: NA

Molecular weight: Translated: 34638; Mature: 34507

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNQVQHQQNKQPPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNAMLKTADPM
CCCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHH
SIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRL
HHHHHHHHHHHHCCCHHCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHH
VALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFKLVNDFSAELYMSHDDIVKH
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECHHHHHHH
AQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
FNYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEAIENG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
NVPTQS
CCCCCC
>Mature Secondary Structure 
TNQVQHQQNKQPPALKTFFESANVQNKIKELVGKNAATFATSVMQIANSNAMLKTADPM
CCCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCHH
SIFNAACMAATLNLPLQNGLGFAYIVPFRNNKEKKTEAQFQIGYKGFIQLAQRSGQFKRL
HHHHHHHHHHHHCCCHHCCCCEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHH
VALPVYKKQLIKKDFINGFEFDWEQEPEQNENPIGYYAYFKLVNDFSAELYMSHDDIVKH
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEECHHHHHHH
AQRYSQTFKKGYGVWHDNFEAMALKTVTKLLLSKQAPLSVEMQQAVLADQAVVKDVENQE
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
FNYTDNIQEAEFLAVVDEATFEQCKQSITNGETTLQELCDSGAYEFSQEQIAELEAIENG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
NVPTQS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]