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The map label for this gene is ninB [H]

Identifier: 148827557

GI number: 148827557

Start: 908461

End: 908877

Strand: Direct

Name: ninB [H]

Synonym: CGSHiGG_04920

Alternate gene names: 148827557

Gene position: 908461-908877 (Clockwise)

Preceding gene: 148827556

Following gene: 148827558

Centisome position: 48.14

GC content: 41.49

Gene sequence:

>417_bases
ATGAGCCAATACAAACCTTTCTTTTTACGTGATCAACGCATTAAAAATAATTGCTTGGATTTAATCAAAGAGCTGCCAAT
AGACGATAAAAAGCCGTTGGTAGTCAAAATCCAACCAATAACACGCTCACTTGAGCAGAACTCAAAACTTCACGCACTAC
TAAGCGATATTAGCAAACAGTGCGAATTTAACGGTAAAAAGCGAGACATCGACACGTGGAAAATGATTATGGTATCGGCT
CACAAAATTGCAACAGGCGGTCAGGCTGAAATGGTAATCGGGCTTGAGGGGGAAGTTATCAATCTACGAGAAAGCACCGC
TCAAATGAGCGTAAAACGACTAGCAAGCCTAATAGAGTACATTACCTGTTGGTGCGTGCAAAATGGCGTGAGATTTAACG
ATAGATGGGGGCTTTAA

Upstream 100 bases:

>100_bases
AAATCGAACAAAATCTTGCGGTTATTTTGGGTTGGAAGATTTAGGTGTGGAGTATAAAGAATGAGTATTGCGATGTTATT
CAAGCGTTGGGAATGATGTT

Downstream 100 bases:

>100_bases
ATGAAACGCTTAAATGATGACGAGATCTTAGAGTTAAAAATCGTGCTTTTTATTGTGGCAGTTTGGGTAATTTTTAATAT
GGTGTTTGGATAATGGCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSA
HKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITCWCVQNGVRFNDRWGL

Sequences:

>Translated_138_residues
MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSA
HKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITCWCVQNGVRFNDRWGL
>Mature_137_residues
SQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQCEFNGKKRDIDTWKMIMVSAH
KIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEYITCWCVQNGVRFNDRWGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ninB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008711 [H]

Pfam domain/function: PF05772 NinB [H]

EC number: NA

Molecular weight: Translated: 15880; Mature: 15749

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQ
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHH
CEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEY
HCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHH
ITCWCVQNGVRFNDRWGL
HHHHHHHCCCEECCCCCC
>Mature Secondary Structure 
SQYKPFFLRDQRIKNNCLDLIKELPIDDKKPLVVKIQPITRSLEQNSKLHALLSDISKQ
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHCCCHHHHHHHHHHHH
CEFNGKKRDIDTWKMIMVSAHKIATGGQAEMVIGLEGEVINLRESTAQMSVKRLASLIEY
HCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHHHHHH
ITCWCVQNGVRFNDRWGL
HHHHHHHCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]