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The map label for this gene is 148827500

Identifier: 148827500

GI number: 148827500

Start: 861089

End: 861736

Strand: Direct

Name: 148827500

Synonym: CGSHiGG_04595

Alternate gene names: NA

Gene position: 861089-861736 (Clockwise)

Preceding gene: 148827499

Following gene: 148827505

Centisome position: 45.63

GC content: 42.9

Gene sequence:

>648_bases
ATGATTGAACAACTCATTCAACAAGCTCAGCCTTATTGGCAACAATATATTGAACACGAATTTGTGCAACAGCTCGCAAA
AGGTACGCTGCCAAAAGCTTGTTTTCAGCATTATTTGAAGCAGGATTACCTCTATCTGTTCCACTATAATCGAGCCTTTG
CTTTGGGTGTATATAAAGCAAAAAATTTTGCGGAAATGGAAATTCCTCGCAAAACGTTAGAGATACTCTGCCAAGAAATT
CAATTGCATTTAAATTATTGCCGCCAATGGGGCATTAGCGAACAAGAGATTTTTGCTACTCAAGAAAGTGCCGCTTGTAT
TGCTTATACCCGCTATTTGCTTGATTGCGGCATGACGGGCGGTTTAGCTGAGCTTTATGCAGCCGTGACCCCTTGTGCTT
TGGGTTACGCTCAAGTTGCCCGTTACATTACTCAACATTATCCTCGCTTACCGAACAACCCTTATCAAACGTGGATTGAC
ACCTATACGAGCGAGGAATTTCAACAATCCGCCCAAGAAACCGTTGATTTTCTTACCGCACTTTGCAAACCGCTAAACCC
AAGCCAACTTGCCGAGATTCAACAGATTTTCACCACCGCAACCAGAATGGAAATTGCGTTTTGGCAAATGGGGTTGGATT
TGGCTTAG

Upstream 100 bases:

>100_bases
ACGTTATCAACAAATGGCAGAATTTATGCAACAAAAAGGCTTAATTCCAAAAGCCTTAGCGTTGAAAGAATATGCGGTAG
AAATTAAATAAGGAAAAAAG

Downstream 100 bases:

>100_bases
GCTTAGGCTTAGGCTTAGGCTTAGATTGGCGATTAGACGAATAACTTTATTTATCTCCAAACGGATAAATTTATTGCGAT
TTTCTACCTCCTCTTTGAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYNRAFALGVYKAKNFAEMEIPRKTLEILCQEI
QLHLNYCRQWGISEQEIFATQESAACIAYTRYLLDCGMTGGLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWID
TYTSEEFQQSAQETVDFLTALCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA

Sequences:

>Translated_215_residues
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYNRAFALGVYKAKNFAEMEIPRKTLEILCQEI
QLHLNYCRQWGISEQEIFATQESAACIAYTRYLLDCGMTGGLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWID
TYTSEEFQQSAQETVDFLTALCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA
>Mature_215_residues
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYNRAFALGVYKAKNFAEMEIPRKTLEILCQEI
QLHLNYCRQWGISEQEIFATQESAACIAYTRYLLDCGMTGGLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWID
TYTSEEFQQSAQETVDFLTALCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=208, Percent_Identity=28.3653846153846, Blast_Score=105, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6325378, Length=208, Percent_Identity=26.9230769230769, Blast_Score=100, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324997, Length=208, Percent_Identity=26.9230769230769, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 25029; Mature: 25029

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYNRAFALGVYKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHH
KNFAEMEIPRKTLEILCQEIQLHLNYCRQWGISEQEIFATQESAACIAYTRYLLDCGMTG
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWIDTYTSEEFQQSAQETVDFLTA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
LCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIEQLIQQAQPYWQQYIEHEFVQQLAKGTLPKACFQHYLKQDYLYLFHYNRAFALGVYKA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEECCCHHHHHHHHH
KNFAEMEIPRKTLEILCQEIQLHLNYCRQWGISEQEIFATQESAACIAYTRYLLDCGMTG
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
GLAELYAAVTPCALGYAQVARYITQHYPRLPNNPYQTWIDTYTSEEFQQSAQETVDFLTA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
LCKPLNPSQLAEIQQIFTTATRMEIAFWQMGLDLA
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]