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The map label for this gene is oapA [H]

Identifier: 148827477

GI number: 148827477

Start: 835438

End: 836724

Strand: Direct

Name: oapA [H]

Synonym: CGSHiGG_04450

Alternate gene names: 148827477

Gene position: 835438-836724 (Clockwise)

Preceding gene: 148827475

Following gene: 148827478

Centisome position: 44.27

GC content: 39.08

Gene sequence:

>1287_bases
ATGGATAAAAATCAACAATCATCTCAAAATGAATTGGATTTAGGGCTTAATCAAGAGCCAATTACACCAAAGAAAACAAT
TCAGCCAAGTTCGTCAATTTTAGGTAAAGCAAAAGGGTTATTTGCCAAAAAAAATCACGTGCAAACTAACTTTCAGCAAC
GTAAAGAACCTACTTTTGGCGATTCATCAACGCAAGAAAATGATCCTTTAATTCCGAGTGAAAATTTGAAAACAGTGCAA
AAGCCTGTTCTTCAAACTTATTCCACAGAAGAAAATATTTCTGCGGTTGATGAAGAAATCAGTGCTGAAAATAACGCGGA
TGAAACCGTCGAAAAGGCTGAAAAACCTATTTTAGCTCAACCAGAAAAATGGAAAATATTACAAGTATTGCCAGCAAAAC
ATCGCCGTTTATTTATGGCTATTTTTGTGTTGGTTATTTTATTGATTATTTTCTTCGCATTAAAACCAAGTTCTGACACC
GTTGAGTCTTTTACTCAATCTAACAGCAATGAAGTTCCTGTGCAGTTCCAATCGTTAGATCAAAGTCAGCCACTGGAAAC
CACGATTTTAGATAATCCTCCTGCACAAAATCAAATGGCTGTAGAACAAGCTAACCAATCTGAATTTGCACCAAAAGCAG
AGGAAGCGGCGAATAATACGACGGCTCAAAACCCATTAGTAGAAAATGCACCAATGCAACAAAATGTTGTTCAATCTCCA
AGTCAAATGCCAAATGAAATGGCTGCGGCATCTGTTGCGCCTATGCAACCAACTCAAGCGGAACAGCCAAAAGCAACTGC
GCCAGTTCAGCCGATGAAAAAAGCGGTGGAGCCACAAGTTGCGCATAAAGATACCGCGAAAAAAGAAGTGAAAGTGGCGG
AGAAAGCACAGGCTCCATCAAAAGCAACGGAACAAAACGTCGCTGAAACAGCAGGAAAAGCACCGATTGTTGAAGCCAAA
CCTGTTCAAGATAGAAAAGAAAAGAAAGTTCAAATCGTTGATGCAAAACCTGTGAGTAAATCTACAGCCTCTCGCCTTTC
TGCAAAAACATTAACTGTGCCGAAAGGTGTTTCACTGATGCAAGTCTTCCGTGATAATCAACTTAATATTTCCGATGTAA
ACGCAATGAGCAAAGCGGTAGGGGCGGGCAATGTATTAAGTAGCTTTAAATCTGGCGATAAAGTAACGGTATCTGTAAAT
AATCAAGGGCGAGTAAATGAAATGCGTTTATCCAATGGTGCGCGTTTTGTTCGTCAGTCTGATGGTTCTTATCAATATAA
AAAATAA

Upstream 100 bases:

>100_bases
TAAAATACACATAATTTTTTCGCCGCACTTTTGGGCTTCTCAATTTTGTGGCTAATTAATATGAATAAGAACAAGCATCA
GAGGCAATCCAGTGAATTCT

Downstream 100 bases:

>100_bases
TTTTTTGGGCGAGTAATCGCCTTTTTTCTTTTTAAGTTATTTTCTCAAGGTAGGATTTATGTTGAAAAAAACATCCCTTA
TTTTTACCGCACTTTTGCTG

Product: opacity associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEPTFGDSSTQENDPLIPSENLKTVQ
KPVLQTYSTEENISAVDEEISAENNADETVEKAEKPILAQPEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPSSDT
VESFTQSNSNEVPVQFQSLDQSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVVQSP
SQMPNEMAAASVAPMQPTQAEQPKATAPVQPMKKAVEPQVAHKDTAKKEVKVAEKAQAPSKATEQNVAETAGKAPIVEAK
PVQDRKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGVSLMQVFRDNQLNISDVNAMSKAVGAGNVLSSFKSGDKVTVSVN
NQGRVNEMRLSNGARFVRQSDGSYQYKK

Sequences:

>Translated_428_residues
MDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEPTFGDSSTQENDPLIPSENLKTVQ
KPVLQTYSTEENISAVDEEISAENNADETVEKAEKPILAQPEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPSSDT
VESFTQSNSNEVPVQFQSLDQSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVVQSP
SQMPNEMAAASVAPMQPTQAEQPKATAPVQPMKKAVEPQVAHKDTAKKEVKVAEKAQAPSKATEQNVAETAGKAPIVEAK
PVQDRKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGVSLMQVFRDNQLNISDVNAMSKAVGAGNVLSSFKSGDKVTVSVN
NQGRVNEMRLSNGARFVRQSDGSYQYKK
>Mature_428_residues
MDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEPTFGDSSTQENDPLIPSENLKTVQ
KPVLQTYSTEENISAVDEEISAENNADETVEKAEKPILAQPEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPSSDT
VESFTQSNSNEVPVQFQSLDQSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVVQSP
SQMPNEMAAASVAPMQPTQAEQPKATAPVQPMKKAVEPQVAHKDTAKKEVKVAEKAQAPSKATEQNVAETAGKAPIVEAK
PVQDRKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGVSLMQVFRDNQLNISDVNAMSKAVGAGNVLSSFKSGDKVTVSVN
NQGRVNEMRLSNGARFVRQSDGSYQYKK

Specific function: Cell envelope protein involved in phase variation [H]

COG id: COG3061

COG function: function code M; Cell envelope opacity-associated protein A

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013731
- InterPro:   IPR007340 [H]

Pfam domain/function: PF04225 OapA; PF08525 OapA_N [H]

EC number: NA

Molecular weight: Translated: 46791; Mature: 46791

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEPTFG
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DSSTQENDPLIPSENLKTVQKPVLQTYSTEENISAVDEEISAENNADETVEKAEKPILAQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
PEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPSSDTVESFTQSNSNEVPVQFQSLD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEHCCCC
QSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVVQSP
CCCCCCEEECCCCCCCCHHHHHHCCHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCH
SQMPNEMAAASVAPMQPTQAEQPKATAPVQPMKKAVEPQVAHKDTAKKEVKVAEKAQAPS
HHCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
KATEQNVAETAGKAPIVEAKPVQDRKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGVSLM
HHHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEEECCCCCHHHHHHHHHHEECCCCCHHHH
QVFRDNQLNISDVNAMSKAVGAGNVLSSFKSGDKVTVSVNNQGRVNEMRLSNGARFVRQS
HHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCHHHHCCC
DGSYQYKK
CCCCCCCC
>Mature Secondary Structure
MDKNQQSSQNELDLGLNQEPITPKKTIQPSSSILGKAKGLFAKKNHVQTNFQQRKEPTFG
CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DSSTQENDPLIPSENLKTVQKPVLQTYSTEENISAVDEEISAENNADETVEKAEKPILAQ
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
PEKWKILQVLPAKHRRLFMAIFVLVILLIIFFALKPSSDTVESFTQSNSNEVPVQFQSLD
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCEEHCCCC
QSQPLETTILDNPPAQNQMAVEQANQSEFAPKAEEAANNTTAQNPLVENAPMQQNVVQSP
CCCCCCEEECCCCCCCCHHHHHHCCHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHCCH
SQMPNEMAAASVAPMQPTQAEQPKATAPVQPMKKAVEPQVAHKDTAKKEVKVAEKAQAPS
HHCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC
KATEQNVAETAGKAPIVEAKPVQDRKEKKVQIVDAKPVSKSTASRLSAKTLTVPKGVSLM
HHHHHHHHHHCCCCCCCCCCCCCCHHCCCEEEEECCCCCHHHHHHHHHHEECCCCCHHHH
QVFRDNQLNISDVNAMSKAVGAGNVLSSFKSGDKVTVSVNNQGRVNEMRLSNGARFVRQS
HHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHCCCHHHHCCC
DGSYQYKK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8559074; 7542800 [H]