Click here to switch to the map view.

The map label for this gene is exbB

Identifier: 148827396

GI number: 148827396

Start: 751863

End: 752315

Strand: Reverse

Name: exbB

Synonym: CGSHiGG_03960

Alternate gene names: 148827396

Gene position: 752315-751863 (Counterclockwise)

Preceding gene: 148827397

Following gene: 148827395

Centisome position: 39.86

GC content: 34.22

Gene sequence:

>453_bases
ATGGTACAACTTTTTGATTTTTTACAGCAGTACAGTGATTATTTTATCATCGGTTTATTATTACTGATGAGCATTATTAT
GCTTGCGATGGTAATTGAACGTTATCTTTTTTTAAGAAAGGTAAGCGTGGCACATTATTCTACTATTCACGCATTAGATA
TTGATTTAAACCGTAATATGACAGTGATTTCTACCATCGGTGCAAATGCGCCTTATGTTGGATTACTTGGTACAGTTATC
GGGATTTTATTAACTTTCTATCAAATCGGTCACGGCGGTGGCGACATTGATCCAAGTGTAATTATGTTGCACTTATCTTT
AGCATTAAAAGCAACTGCATTAGGTATTCTAGTGGCTATTCCCTCTATGGTGTTTTATAACGGTTTGGGGCGTAAAGTTG
AAGTTAATCGTTTAAAATGGAAAGTATTAAGCGAACAAAAAGATAAGGAATAA

Upstream 100 bases:

>100_bases
GGTTTACGCATTATTTAGCCTTTGCTAAAATCCCCCGTATGATTGAAATTCATTCTCAATTATATTCTCAAAAAAATTTC
TCAAATAACAAGGAAAAAAA

Downstream 100 bases:

>100_bases
TTCGTGAAAAAATTCGATGAAATCAACATTATCCCTTTCATTGATATTATGTTGGTGCTACTTACTGTGGTGCTTATTAC
TGCATCTTTTATCTCTCAAG

Product: transport protein ExbB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MVQLFDFLQQYSDYFIIGLLLLMSIIMLAMVIERYLFLRKVSVAHYSTIHALDIDLNRNMTVISTIGANAPYVGLLGTVI
GILLTFYQIGHGGGDIDPSVIMLHLSLALKATALGILVAIPSMVFYNGLGRKVEVNRLKWKVLSEQKDKE

Sequences:

>Translated_150_residues
MVQLFDFLQQYSDYFIIGLLLLMSIIMLAMVIERYLFLRKVSVAHYSTIHALDIDLNRNMTVISTIGANAPYVGLLGTVI
GILLTFYQIGHGGGDIDPSVIMLHLSLALKATALGILVAIPSMVFYNGLGRKVEVNRLKWKVLSEQKDKE
>Mature_150_residues
MVQLFDFLQQYSDYFIIGLLLLMSIIMLAMVIERYLFLRKVSVAHYSTIHALDIDLNRNMTVISTIGANAPYVGLLGTVI
GILLTFYQIGHGGGDIDPSVIMLHLSLALKATALGILVAIPSMVFYNGLGRKVEVNRLKWKVLSEQKDKE

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EXBB_HAEIN (P43008)

Other databases:

- EMBL:   U08209
- EMBL:   L42023
- PIR:   H64057
- RefSeq:   NP_438422.1
- GeneID:   949376
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0253
- TIGR:   HI_0253
- HOGENOM:   HBG681852
- OMA:   MLTFYNM
- ProtClustDB:   CLSK870388
- BioCyc:   HINF71421:HI_0253-MONOMER
- InterPro:   IPR002898
- InterPro:   IPR014172
- TIGRFAMs:   TIGR02805

Pfam domain/function: PF01618 MotA_ExbB

EC number: NA

Molecular weight: Translated: 16729; Mature: 16729

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x118a4d4c)-; HASH(0x11116c70)-; HASH(0x10c52a4c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQLFDFLQQYSDYFIIGLLLLMSIIMLAMVIERYLFLRKVSVAHYSTIHALDIDLNRNM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCE
TVISTIGANAPYVGLLGTVIGILLTFYQIGHGGGDIDPSVIMLHLSLALKATALGILVAI
EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PSMVFYNGLGRKVEVNRLKWKVLSEQKDKE
HHHHHHHCCCCEEEHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MVQLFDFLQQYSDYFIIGLLLLMSIIMLAMVIERYLFLRKVSVAHYSTIHALDIDLNRNM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCE
TVISTIGANAPYVGLLGTVIGILLTFYQIGHGGGDIDPSVIMLHLSLALKATALGILVAI
EEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
PSMVFYNGLGRKVEVNRLKWKVLSEQKDKE
HHHHHHHCCCCEEEHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7828935; 7542800