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The map label for this gene is ssb [H]

Identifier: 148827387

GI number: 148827387

Start: 738927

End: 739433

Strand: Direct

Name: ssb [H]

Synonym: CGSHiGG_03885

Alternate gene names: 148827387

Gene position: 738927-739433 (Clockwise)

Preceding gene: 148827377

Following gene: 148827388

Centisome position: 39.15

GC content: 43.59

Gene sequence:

>507_bases
ATGGCTGGAATTAATAAAGTCATTATTGTAGGTCATTTAGGTAATGATCCTGAAATTCGTACTATGCCAAACGGCGATGC
CGTTGCAAATATCAGCGTAGCAACCAGTGAAAGCTGGAACGATCGTAATACTGGCGAACGCCGTGAAGTAACAGAATGGC
ACCGCATTGTATTCTATCGTCGTCAAGCAGAGATTTGCGGCGAATATTTACGCAAAGGCTCTCAAGTGTATGTGGAGGGT
CGTTTAAAAACACGTAAATGGCAAGATCAAAACGGTCAAGATCGTTACACCACAGAAATTCAAGGCGATGTAATGCAAAT
GCTTGGTGGACGTAATCAAAACGCAGGTGGTTTCTCTAATGAGATGGGATCTTCACCACAACCTTCTTACCAAGCTCGTC
AAACTAACAATGGTAATAGTTATCAATCATCTCGCCCAGCTCCACAACAAGCTGCACCACAGGCTGAACCACCAATGGAT
GGATTTGATGACGATATTCCGTTCTGA

Upstream 100 bases:

>100_bases
TTTTAATATCTGTGCAAATATCCAGTTAAAATATATAGATCTTTTAAAAAATTTCAGGCAAAATAACCGCACTTTTTTAG
ATAAAAAATGAGGTTTTTTT

Downstream 100 bases:

>100_bases
GTTACATATAATTAAATATTGTAAAATATAACACAAAAAATGAGAGAAACCTTATAAAATAAGGTTTCTCTTTTTTTTAC
ACTTTTATTGACACAGCTAA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGFSNEMGSSPQPSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMD
GFDDDIPF

Sequences:

>Translated_168_residues
MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEG
RLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGFSNEMGSSPQPSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMD
GFDDDIPF
>Mature_167_residues
AGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYRRQAEICGEYLRKGSQVYVEGR
LKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGFSNEMGSSPQPSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMDG
FDDDIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=175, Percent_Identity=56, Blast_Score=181, Evalue=2e-47,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18838; Mature: 18707

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYR
CCCCCEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGFSN
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCC
EMGSSPQPSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMDGFDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREVTEWHRIVFYR
CCCCEEEEEEECCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH
RQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEIQGDVMQMLGGRNQNAGGFSN
HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCCCC
EMGSSPQPSYQARQTNNGNSYQSSRPAPQQAAPQAEPPMDGFDDDIPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8063092; 7542800 [H]