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The map label for this gene is ytfJ [C]

Identifier: 148827201

GI number: 148827201

Start: 500076

End: 500630

Strand: Reverse

Name: ytfJ [C]

Synonym: CGSHiGG_02720

Alternate gene names: 148827201

Gene position: 500630-500076 (Counterclockwise)

Preceding gene: 148827203

Following gene: 148827200

Centisome position: 26.53

GC content: 36.94

Gene sequence:

>555_bases
ATGAAAAAACAAATTCTTGCCTTAGTTTGTGGCGTAATGTTTAGTAGTTTGACTTGGGCGCACAATTTGCAATTAGAGCA
ATTTTTACCAGCAGTGCAAGTAACGGAGTATGGTGAAATTGTGCTTTCTGGAAAAGATACTGTGTTTCAACCTTGGGGTT
CTGCGGAATTAGCGGGCAAAGTGCGTGTTGTTCATCATTTAGCGGGTAGAACGGCTGCAAAAGAGAAAAATCAGTCGATG
ATTGATGCGATAAAAGCATCCCATTTTAATCCTGTAAAATACCAAACAACCACTATTATTAATGCGGATGATGCGATTGT
TGGTACAGGTATGTTTGTAAAAAATAGTGCGCAAAAAGGCAAACAGGAAAATCCACATAGCCAAGTTGTGTTAGATGATA
AAAGTGCGGTAAAAAATGCTTGGGGATTAAATTCTAAAGATAGTGCAATTATCGTGTTAGACAAAACGGGAAAAGTAAAA
TTTGTGAAAGAAGGAAAATTGTCTGATAGCGATATTCAGACTGTTATTTCACTAGTGAATGGATTGACCAAATAA

Upstream 100 bases:

>100_bases
GTTTTCCTTCCTGATTACATATAATAGGCGTACGAGTATAGCAAAAAAGATGTCTTTCGCCAAAGCGTGAAAGTTTTTGA
TAAATTTTTGAGGAAAATGT

Downstream 100 bases:

>100_bases
CGTAATACAAAGTAAAAATCCCTAAGCCTTGTGACTTAGGGATTTCTTAATTCTGATGGCGGAGGAATAGGGATTCGAAC
CCTAGGAGGGCGTAAACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKKQILALVCGVMFSSLTWAHNLQLEQFLPAVQVTEYGEIVLSGKDTVFQPWGSAELAGKVRVVHHLAGRTAAKEKNQSM
IDAIKASHFNPVKYQTTTIINADDAIVGTGMFVKNSAQKGKQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVK
FVKEGKLSDSDIQTVISLVNGLTK

Sequences:

>Translated_184_residues
MKKQILALVCGVMFSSLTWAHNLQLEQFLPAVQVTEYGEIVLSGKDTVFQPWGSAELAGKVRVVHHLAGRTAAKEKNQSM
IDAIKASHFNPVKYQTTTIINADDAIVGTGMFVKNSAQKGKQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVK
FVKEGKLSDSDIQTVISLVNGLTK
>Mature_184_residues
MKKQILALVCGVMFSSLTWAHNLQLEQFLPAVQVTEYGEIVLSGKDTVFQPWGSAELAGKVRVVHHLAGRTAAKEKNQSM
IDAIKASHFNPVKYQTTTIINADDAIVGTGMFVKNSAQKGKQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVK
FVKEGKLSDSDIQTVISLVNGLTK

Specific function: Unknown

COG id: COG3054

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfJ [H]

Homologues:

Organism=Escherichia coli, GI1790662, Length=182, Percent_Identity=42.8571428571429, Blast_Score=164, Evalue=4e-42,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006513 [H]

Pfam domain/function: PF09695 YtfJ_HI0045 [H]

EC number: NA

Molecular weight: Translated: 19990; Mature: 19990

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQILALVCGVMFSSLTWAHNLQLEQFLPAVQVTEYGEIVLSGKDTVFQPWGSAELAGK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEECCCEEEECCCCCEECCCCCCHHHHH
VRVVHHLAGRTAAKEKNQSMIDAIKASHFNPVKYQTTTIINADDAIVGTGMFVKNSAQKG
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCCEEECCHHCC
KQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVKFVKEGKLSDSDIQTVISLVN
CCCCCCCEEEECCHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHH
GLTK
HCCC
>Mature Secondary Structure
MKKQILALVCGVMFSSLTWAHNLQLEQFLPAVQVTEYGEIVLSGKDTVFQPWGSAELAGK
CCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEEECCCEEEECCCCCEECCCCCCHHHHH
VRVVHHLAGRTAAKEKNQSMIDAIKASHFNPVKYQTTTIINADDAIVGTGMFVKNSAQKG
HHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCCEEECCHHCC
KQENPHSQVVLDDKSAVKNAWGLNSKDSAIIVLDKTGKVKFVKEGKLSDSDIQTVISLVN
CCCCCCCEEEECCHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHH
GLTK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]