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The map label for this gene is ycjF [C]

Identifier: 148827199

GI number: 148827199

Start: 497966

End: 499030

Strand: Reverse

Name: ycjF [C]

Synonym: CGSHiGG_02710

Alternate gene names: 148827199

Gene position: 499030-497966 (Counterclockwise)

Preceding gene: 148827200

Following gene: 148827198

Centisome position: 26.44

GC content: 35.77

Gene sequence:

>1065_bases
ATGGAAAAACAAATTTTTGAACATTCAGTTAATGTAGAGGAAGAACACTATCAGCCCAAGCAAGAATTCCATAATATGGA
AGCAAAGCTAGATGAAGCGTTGGACGGAGAGTTACTTGATGCTCAACTTGAACAAGCATTGAAACCAAAATCCAGTTTTA
GAAAAACTTTATTAAAATTTACCGCACTTTTATTTGGCTTGGCGACGGTTGCGCAATCCGTGCAGTGGATTTGGGATAGC
TATCAACAACATCAATGGATTTATCTTGCTTTTGCTTTAGTCAGTTTGATTATCATTTTATTGGGTATTAAAGAGATTAT
TTGTGAGTGGCGACGTTTAGTTCGTTTAAAAAAACGTGAGCAATTGCAACAACAAAGTCAGCAGATTTGGTTAGAAAGTG
CGGTAAAAAATGGTGATGTTTTTTCCGTTCATAACGCAGAAAAAAGTAAAATTCTTTGCTTAGATATTGCAAAATCTTTA
GGTTTGGAAAATGATTCTCCAGCGGTAATTCAATGGCAACACCAATTAAATGAAGCTTATTCAGCGCAAGAAATTGCTCA
TTTATTCAGTCGTCATGTTTTGTCTTCTTTTGATGCACAAGCTAAAAAATTGATTAGTAAAATGGCAGCTGAATCAGCTG
TGATTGTCGCGATTAGTCCGCTTGCTGTGGTGGATATGTTTTTTATCGCGTGGCGTAATCTTCGATTAATGAATAAGATT
GCTGAAATTTATGGGATTGAATTAGGGTATTTTTCACGTATTAGATTGTTAAGAATGGTATTGGTCAATATCGCTTTTGC
TGGAGCAACCGAAGTGGCACAAGATATTGGAATGGATTGGCTTTCTCAAGATGTGACAGCAAAATTATCTACACGTATCG
CTCAAGGAATTGGTGTGGGATTACTCACTGCTAGATTAGGCGTGAAAGCAATGGAACTTTGTCGTCCGTTAGCATTTCAA
TTAAACGAAAAACCAAAACTGTCATATATTCAACAGGAATTACTTAGTTCGGTAAAAGATATTGTTCTCGGTAAAAATAA
AATTTACAAAAAGGAGCAAATCTGA

Upstream 100 bases:

>100_bases
TGAGTTTATTAAGATTACTTTCTATCTTTTCAAGTGATGAATAATGATTGAATTTTGACTTTATGACCCACTATTTAGTG
GGTTATTTTTGGGATAGGCA

Downstream 100 bases:

>100_bases
TGGAAATCGAGGTTGTTTATCAACATAGCGATTTTATTATTATCAACAAGTCTGAGGGTATTAGCGTTCATAAAGATCAA
GAAGAACAAGGCTTAACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKFTALLFGLATVAQSVQWIWDS
YQQHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKREQLQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSL
GLENDSPAVIQWQHQLNEAYSAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVGLLTARLGVKAMELCRPLAFQ
LNEKPKLSYIQQELLSSVKDIVLGKNKIYKKEQI

Sequences:

>Translated_354_residues
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKFTALLFGLATVAQSVQWIWDS
YQQHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKREQLQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSL
GLENDSPAVIQWQHQLNEAYSAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVGLLTARLGVKAMELCRPLAFQ
LNEKPKLSYIQQELLSSVKDIVLGKNKIYKKEQI
>Mature_354_residues
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKFTALLFGLATVAQSVQWIWDS
YQQHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKREQLQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSL
GLENDSPAVIQWQHQLNEAYSAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVGLLTARLGVKAMELCRPLAFQ
LNEKPKLSYIQQELLSSVKDIVLGKNKIYKKEQI

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family [H]

Homologues:

Organism=Escherichia coli, GI1787582, Length=345, Percent_Identity=41.1594202898551, Blast_Score=267, Evalue=9e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021147
- InterPro:   IPR006507 [H]

Pfam domain/function: PF05128 DUF697 [H]

EC number: NA

Molecular weight: Translated: 40350; Mature: 40350

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKF
CCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHH
TALLFGLATVAQSVQWIWDSYQQHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSLGLENDSPAVIQWQHQLNEAY
HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHEHHHHHHHHHH
SAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLTARLGVKAMELCRPLAFQLNEKPKLSYIQQELLSSVKDIVLGKNKIYKKEQI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHCCHHCCC
>Mature Secondary Structure
MEKQIFEHSVNVEEEHYQPKQEFHNMEAKLDEALDGELLDAQLEQALKPKSSFRKTLLKF
CCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHH
TALLFGLATVAQSVQWIWDSYQQHQWIYLAFALVSLIIILLGIKEIICEWRRLVRLKKRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLQQQSQQIWLESAVKNGDVFSVHNAEKSKILCLDIAKSLGLENDSPAVIQWQHQLNEAY
HHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHEHHHHHHHHHH
SAQEIAHLFSRHVLSSFDAQAKKLISKMAAESAVIVAISPLAVVDMFFIAWRNLRLMNKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
AEIYGIELGYFSRIRLLRMVLVNIAFAGATEVAQDIGMDWLSQDVTAKLSTRIAQGIGVG
HHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
LLTARLGVKAMELCRPLAFQLNEKPKLSYIQQELLSSVKDIVLGKNKIYKKEQI
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]