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The map label for this gene is lptF [H]

Identifier: 148827127

GI number: 148827127

Start: 404576

End: 405679

Strand: Reverse

Name: lptF [H]

Synonym: CGSHiGG_02270

Alternate gene names: 148827127

Gene position: 405679-404576 (Counterclockwise)

Preceding gene: 148827129

Following gene: 148827126

Centisome position: 21.5

GC content: 36.5

Gene sequence:

>1104_bases
ATGATTTTAATTCGATATTTAATAAAAGAAGTTTTCAAAAGCCAAATCGCAATTTTACTAATTTTGCTATTGATTTTTTT
TAGTCAGCAGTTTGTGCGTGTATTAGGTGCGGCGGCAAATGGGAATGTGCCAGCTGATTTGGTTTTCTCTTTATTAGGCT
TAGGAATGCCGACAATGGCGCAGTTGATGTTGCCACTATGTTTATTTATTGCGATTTTACTGACTTTTGGTCGCCTTTAC
GCTGAAAGTGAAATCACAGTGATGCGCGCGTGCGGTGTGGGGCAACAGATTTTGGTTAAAGTGGCACTGATTATGTCTTT
ATTAACGGCAGGTATTGCCGCTTATAACGCATTATGGCTTTCGCCTTGGGCAATTCAAAAACAAGTGAATATGGTGGAAG
ATGCAAAGGCTAATCCAACCGTTGGCGTATTATCTTCAGGTCAGTTTATTTCTACCAATAACAATAACGTTGTGTTATTT
ATTGATAAGATTAAAGATAATCAAATCCGCAATGTTTATTTATTTCAAATGACACCTCAAAAACAAACAAAACCTTCAGT
GATAACAGCTGAAAAAGGGGAATTAATTGCGTTGCCAAATGGTGATCAAGTCTTAAATTTGAAAAATACAAAACGGGTTG
AAGGAACCTCCGCTTTGCCAGATTTTCGCATTACGCATTTTGATGAATATCAAGCCTATTTAGGTTATCAATCCGCAGAA
AATACCAATGATGAAGTAGCAGAATTAACATTGTCTCAACTTATCGATTTAGATTCTTCTTCTGCGAAAGCTGAATTGCA
TTGGCGTATTACCTTAATTTTGGCAGTGCCATTAATGGCATTGATTGCTGTACCATTAAGTCGCGTAAATCCTCGACAAG
GTAGATTTGCCAAAATTTTACCCGCACTTTTACTCTATTTAATTTATTTCTTGTTACAAAGCTCTTTTAAATCTGCAGGT
TCAGCGGGAAAATTAGAGGCTGAACTTTTAATGCCGCTTGTTAATATCGGATTTTTCTTACTTGCTGTGGTGTTGAATAG
CTGGGACAGTGAAATAATGTATAAATTTCGCTATTTATTCAGTAAGAAAGGATCGGCAAAATGA

Upstream 100 bases:

>100_bases
TCCTTAAATTTCTGTTTAATTCAGCGAAAATAAGTTATCATATGCGGCCGATTTTATCCAGTTTTCCTCCGTTTTAGATT
TAGAAAAAAAACGAAATAAG

Downstream 100 bases:

>100_bases
TAAATACCCTTGATCGTTATATTGGAAAAAGTATTCTTGGCGCGATTTTTGCTACTTTAATGACTTTAGTGGGATTGTCG
GCGATTATTAAATTTGTCGA

Product: 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 367

Protein sequence:

>367_residues
MILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQLMLPLCLFIAILLTFGRLY
AESEITVMRACGVGQQILVKVALIMSLLTAGIAAYNALWLSPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLF
IDKIKDNQIRNVYLFQMTPQKQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAE
NTNDEVAELTLSQLIDLDSSSAKAELHWRITLILAVPLMALIAVPLSRVNPRQGRFAKILPALLLYLIYFLLQSSFKSAG
SAGKLEAELLMPLVNIGFFLLAVVLNSWDSEIMYKFRYLFSKKGSAK

Sequences:

>Translated_367_residues
MILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQLMLPLCLFIAILLTFGRLY
AESEITVMRACGVGQQILVKVALIMSLLTAGIAAYNALWLSPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLF
IDKIKDNQIRNVYLFQMTPQKQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAE
NTNDEVAELTLSQLIDLDSSSAKAELHWRITLILAVPLMALIAVPLSRVNPRQGRFAKILPALLLYLIYFLLQSSFKSAG
SAGKLEAELLMPLVNIGFFLLAVVLNSWDSEIMYKFRYLFSKKGSAK
>Mature_367_residues
MILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMAQLMLPLCLFIAILLTFGRLY
AESEITVMRACGVGQQILVKVALIMSLLTAGIAAYNALWLSPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLF
IDKIKDNQIRNVYLFQMTPQKQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAE
NTNDEVAELTLSQLIDLDSSSAKAELHWRITLILAVPLMALIAVPLSRVNPRQGRFAKILPALLLYLIYFLLQSSFKSAG
SAGKLEAELLMPLVNIGFFLLAVVLNSWDSEIMYKFRYLFSKKGSAK

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=365, Percent_Identity=49.5890410958904, Blast_Score=327, Evalue=5e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40682; Mature: 40682

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHH
QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQQILVKVALIMSLLTAGIAAYNALWL
HHHHHHHHHHHHHHHHHHHHCCCCHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ
CCHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEEEECCCCCCCCEEEEEEECCC
KQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAE
CCCCCCEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
NTNDEVAELTLSQLIDLDSSSAKAELHWRITLILAVPLMALIAVPLSRVNPRQGRFAKIL
CCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
PALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVLNSWDSEIMYKFRYLF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SKKGSAK
HCCCCCC
>Mature Secondary Structure
MILIRYLIKEVFKSQIAILLILLLIFFSQQFVRVLGAAANGNVPADLVFSLLGLGMPTMA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHH
QLMLPLCLFIAILLTFGRLYAESEITVMRACGVGQQILVKVALIMSLLTAGIAAYNALWL
HHHHHHHHHHHHHHHHHHHHCCCCHHEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SPWAIQKQVNMVEDAKANPTVGVLSSGQFISTNNNNVVLFIDKIKDNQIRNVYLFQMTPQ
CCHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEEEECCCCCCCCEEEEEEECCC
KQTKPSVITAEKGELIALPNGDQVLNLKNTKRVEGTSALPDFRITHFDEYQAYLGYQSAE
CCCCCCEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
NTNDEVAELTLSQLIDLDSSSAKAELHWRITLILAVPLMALIAVPLSRVNPRQGRFAKIL
CCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
PALLLYLIYFLLQSSFKSAGSAGKLEAELLMPLVNIGFFLLAVVLNSWDSEIMYKFRYLF
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
SKKGSAK
HCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]