Click here to switch to the map view.

The map label for this gene is lst [H]

Identifier: 148827122

GI number: 148827122

Start: 397824

End: 398738

Strand: Reverse

Name: lst [H]

Synonym: CGSHiGG_02245

Alternate gene names: 148827122

Gene position: 398738-397824 (Counterclockwise)

Preceding gene: 148827123

Following gene: 148827121

Centisome position: 21.13

GC content: 28.74

Gene sequence:

>915_bases
ATGAATCTCATTCTTTGTTGTACACCATTGCAAGTATTAATTGCGAGAAAAATAATTGAATTACATCCTAACGAGCAATT
CTTTGGCGTAATGTTTGGTGGGGTATGGGATAAAAAAAGAACCTTGTATGCGAGTAAATTAGCGGAGGTTTGTAGTGATT
CGATGAATATTGATACGGGAAAAGATCTAAAAGGTTTCGATTTTCTCAAGTTAATGCGCCAGCTTAAGAATAAAATTACG
CACAAAGGTTTTGATAAGGTTTTTCTCGCCAATCTTAATTCATTATGGCTACAAACTTATCTTAGTCATGTTTCATTTAA
AGAGCTTTATACCTTTGATGATGGTTCAGATAATATTTTCCCACATCCTAATTTATTGAGAGAGCCTGACACATTTAAAT
ATAAACTGATTAAAGCTTTTATTGGCGATAAATATAGTGTGAATAAATTATTTAAAAAAATAAAAAAACATTATACGGTT
TATCCTAATTACAAAAATATTGTTTCTAATATTGAACCAATTTCTTTATGGGATAATAAAGTAGATGGTGATATAGATGG
CAAGGTCTCATTTTTTATTGGGCAACCATTGTTAAATACAAAAGAGGAAAATATCTCATTAATAAAAAAATTAAAAGAAC
AAATTTCTTTTGATTATTATTTCCCCCATCCAGCAGAAGATTATCGAGTTGATGGGGTAAATTATGTTGAATCTGAATTA
ATTTTTGAAGATTACGTATTTAAACATTTATCAAATAAAAAAATAATTATTTATACGTTCTTCAGTTCTGTTGCATTTAA
TTTGTTAAGTCATCCTAATGTAGAAATTCGTTTTATTAGAACGAGTATTCCAAGATGGCAATTCTGTTACGATTCATTTC
CAGACCTTGGATTAACGATTTATAAGGAAATTTAA

Upstream 100 bases:

>100_bases
CTTTTACAGAAATTAAATATATCCCTTATGCTGGAATTATTGGTTCGCTTTCCATTATTCCTATTCTTTATTTTATGACA
TCTAAAGTGAGTAAAACCCT

Downstream 100 bases:

>100_bases
AATGAAAAAAATTGGTTTCTTTATAATGAATATCGGAAGTGCGGGGGAACGGAGCGCGTTTCTATTAATGTTGCTAATGC
TCTTGCTAAACAGGGATATG

Product: lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Alpha 2,3-ST; Beta-galactoside alpha-2,3-sialyltransferase; Lipooligosaccharide sialyltransferase [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNLILCCTPLQVLIARKIIELHPNEQFFGVMFGGVWDKKRTLYASKLAEVCSDSMNIDTGKDLKGFDFLKLMRQLKNKIT
HKGFDKVFLANLNSLWLQTYLSHVSFKELYTFDDGSDNIFPHPNLLREPDTFKYKLIKAFIGDKYSVNKLFKKIKKHYTV
YPNYKNIVSNIEPISLWDNKVDGDIDGKVSFFIGQPLLNTKEENISLIKKLKEQISFDYYFPHPAEDYRVDGVNYVESEL
IFEDYVFKHLSNKKIIIYTFFSSVAFNLLSHPNVEIRFIRTSIPRWQFCYDSFPDLGLTIYKEI

Sequences:

>Translated_304_residues
MNLILCCTPLQVLIARKIIELHPNEQFFGVMFGGVWDKKRTLYASKLAEVCSDSMNIDTGKDLKGFDFLKLMRQLKNKIT
HKGFDKVFLANLNSLWLQTYLSHVSFKELYTFDDGSDNIFPHPNLLREPDTFKYKLIKAFIGDKYSVNKLFKKIKKHYTV
YPNYKNIVSNIEPISLWDNKVDGDIDGKVSFFIGQPLLNTKEENISLIKKLKEQISFDYYFPHPAEDYRVDGVNYVESEL
IFEDYVFKHLSNKKIIIYTFFSSVAFNLLSHPNVEIRFIRTSIPRWQFCYDSFPDLGLTIYKEI
>Mature_304_residues
MNLILCCTPLQVLIARKIIELHPNEQFFGVMFGGVWDKKRTLYASKLAEVCSDSMNIDTGKDLKGFDFLKLMRQLKNKIT
HKGFDKVFLANLNSLWLQTYLSHVSFKELYTFDDGSDNIFPHPNLLREPDTFKYKLIKAFIGDKYSVNKLFKKIKKHYTV
YPNYKNIVSNIEPISLWDNKVDGDIDGKVSFFIGQPLLNTKEENISLIKKLKEQISFDYYFPHPAEDYRVDGVNYVESEL
IFEDYVFKHLSNKKIIIYTFFSSVAFNLLSHPNVEIRFIRTSIPRWQFCYDSFPDLGLTIYKEI

Specific function: Transfers sialic acid from the substrate CMP-sialic acid donor to the terminal beta-D-galactosyl-1,4-acetyl-beta-D- glucosamine on the lacto-N-neotetraose branch of the lipooligosaccharide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 52 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012477 [H]

Pfam domain/function: PF07922 Glyco_transf_52 [H]

EC number: NA

Molecular weight: Translated: 35676; Mature: 35676

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLILCCTPLQVLIARKIIELHPNEQFFGVMFGGVWDKKRTLYASKLAEVCSDSMNIDTG
CCEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC
KDLKGFDFLKLMRQLKNKITHKGFDKVFLANLNSLWLQTYLSHVSFKELYTFDDGSDNIF
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
PHPNLLREPDTFKYKLIKAFIGDKYSVNKLFKKIKKHYTVYPNYKNIVSNIEPISLWDNK
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCEEECCCHHHHHCCCCCEEECCCC
VDGDIDGKVSFFIGQPLLNTKEENISLIKKLKEQISFDYYFPHPAEDYRVDGVNYVESEL
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCEECCCHHHHHHH
IFEDYVFKHLSNKKIIIYTFFSSVAFNLLSHPNVEIRFIRTSIPRWQFCYDSFPDLGLTI
HHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCCCCCCEEE
YKEI
EECC
>Mature Secondary Structure
MNLILCCTPLQVLIARKIIELHPNEQFFGVMFGGVWDKKRTLYASKLAEVCSDSMNIDTG
CCEEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCC
KDLKGFDFLKLMRQLKNKITHKGFDKVFLANLNSLWLQTYLSHVSFKELYTFDDGSDNIF
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
PHPNLLREPDTFKYKLIKAFIGDKYSVNKLFKKIKKHYTVYPNYKNIVSNIEPISLWDNK
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCEEECCCHHHHHCCCCCEEECCCC
VDGDIDGKVSFFIGQPLLNTKEENISLIKKLKEQISFDYYFPHPAEDYRVDGVNYVESEL
CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCCCCEECCCHHHHHHH
IFEDYVFKHLSNKKIIIYTFFSSVAFNLLSHPNVEIRFIRTSIPRWQFCYDSFPDLGLTI
HHHHHHHHHCCCCEEEEEEEHHHHHHHHHCCCCEEEEEEEECCCCHHHHHCCCCCCCEEE
YKEI
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]