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The map label for this gene is yraN [C]

Identifier: 148827079

GI number: 148827079

Start: 348844

End: 349203

Strand: Direct

Name: yraN [C]

Synonym: CGSHiGG_01960

Alternate gene names: 148827079

Gene position: 348844-349203 (Clockwise)

Preceding gene: 148827078

Following gene: 148827080

Centisome position: 18.48

GC content: 36.67

Gene sequence:

>360_bases
ATGTTTTCTTTAAAACGTCAGCAAGGGGCGAGCTTTGAGCATCAAGCTCGCCTTTTTTTAGAATCAAAAGGCTTAACATT
TATTGCGGCTAATCAAAATTTCAAATGTGGTGAACTTGATCTAATAATGAATGACAAAGAAACTATCGTCTTTGTTGAAG
TTCGCCAACGAAGTCATTCCGCCTATGGTTCTGCCATAGAAAGCGTAGATTGGCGAAAACAACAAAAATGGTTAGATGCC
GCAAATTTATGGCTTGCAAAACAAAATATGAGCTTAGAAGATGCTAATTGCCGCTTTGATTTAATCGCTTTTGGCAAAAC
ACCTCAAGATATTCAATGGATTCCTAATTTTCTCGATTAA

Upstream 100 bases:

>100_bases
GCTTAACAGGGATTTTAAGTGCTGATACCAACTGTAATGTTGAACGCGATATGACTTGGTATCAATATCAAGATGGTGCA
ATTGTACCAGTTGCAAACTA

Downstream 100 bases:

>100_bases
TGGCTTTTTATAATGTTACAAAAAGTAAAAGATATTTATAGCGAAAGTATTCAAATTCAAATTGCAGCATCTAGCATGCT
TTCTGAAAATATTACCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MFSLKRQQGASFEHQARLFLESKGLTFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHSAYGSAIESVDWRKQQKWLDA
ANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD

Sequences:

>Translated_119_residues
MFSLKRQQGASFEHQARLFLESKGLTFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHSAYGSAIESVDWRKQQKWLDA
ANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD
>Mature_119_residues
MFSLKRQQGASFEHQARLFLESKGLTFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHSAYGSAIESVDWRKQQKWLDA
ANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=111, Percent_Identity=49.5495495495495, Blast_Score=110, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13800; Mature: 13800

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLKRQQGASFEHQARLFLESKGLTFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHS
CCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCC
AYGSAIESVDWRKQQKWLDAANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD
HHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCHHCCCCCCC
>Mature Secondary Structure
MFSLKRQQGASFEHQARLFLESKGLTFIAANQNFKCGELDLIMNDKETIVFVEVRQRSHS
CCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCEEEEECCCCEEEEEEEECCCCC
AYGSAIESVDWRKQQKWLDAANLWLAKQNMSLEDANCRFDLIAFGKTPQDIQWIPNFLD
HHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEECCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]