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The map label for this gene is yraM [C]

Identifier: 148827078

GI number: 148827078

Start: 347117

End: 348844

Strand: Direct

Name: yraM [C]

Synonym: CGSHiGG_01955

Alternate gene names: 148827078

Gene position: 347117-348844 (Clockwise)

Preceding gene: 148827075

Following gene: 148827079

Centisome position: 18.39

GC content: 39.24

Gene sequence:

>1728_bases
ATGTCTATTCTATTACAAGGCGGACGTTTTAAAAAACGTTTAATGCCAATTTTATTGTCAATGGCTTTAGCTGGCTGTTC
AAATCTACTTGGTAGCAATTTCACGCAAACCTTACAAAAAGATGCAAATGCAAGTTCTGAATTTTATATAAACAAATTAG
GGCAAACACAAGAACTTGAAGATCAACAAACCTATAAATTGCTCGCGGCTCGCGTGTTAATCCGTGAAAATAAGGTTGAA
CAATCGGCAGCGTTATTGAGGGAATTAGGCGAATTAAATGATGCGCAAAAATTAGATCGTGCATTAATTGAAGCGAGAAT
TTCTGCTGCAAAAAATGCCAATGACGTCGCGCAAAATCAATTACGTGCATTGGATTTAAATAAACTAAGCCCGTCACAAA
AATCTCGTTATTACGAAACCTTAGCTATTGTTGCCGAAAACCGTAAAGACATGATTGAAGCGGTAAAAGCGCGGATAGAA
ATGGATAAGAATTTAACAGATGTACAACGTCGTCAAGATAATATTGATAAAACTTGGGCTTTATTGCGTTCAGCGAATAC
TGGCGTTATTAATAATGCCTCTGATGAAGGTAATGCAGCTTTAGGCGGTTGGCTAACATTAATCAAAGCCTACAACGATT
ATATTCGTCAGCCTGTACAATTAAGCCAAGCCTTACAAAGTTGGAAAAATGCTTATCCAAATCATGCAGCCGCAACGTTG
TTCCCAAAAGAATTGCTTACATTGCTTAATTTCCAACAAACGAATGTGTCACAAATTGGTTTACTCTTGCCATTAAGTGG
TGACGGACAAATTCTTGGCACAACCATTCAATCGGGTTTCAACGACGCGAAAGGTAACTCAACCATTCCAGTGCAAGTAT
TTGATACCTCAATGAATTCTGTACAAGATATCATTGCGCAAGCAAAACAAACAGGAATTAAAACCTTAGTCGGCCCATTA
CTAAAACAAAATCTTGATGTGATTTTAGCGGATCCTGCTCAAATTCAAGGTATGGATGTGCTTGCATTAAATGCCACACC
AAATTCTCGTGCGATTCCTCAACTTTGTTATTACGGACTTTCTCCAGAAGATGAAGCTGAATCTGCCGCCAATAAAATGT
GGAACGATGGCGTGCGTAATCCACTTGTCGCAATGCCGCAAAATGATTTAGGACAACGCGTAGGCAATGCCTTTAATGTG
CGTTGGCAGCAATTAGCTGGTACTGATGCGAATATCCGTTACTACAATTTGCCTGCGGATGTGACCTATTTCGTTCAAGA
AAATAACTCAAATACAACCGCACTTTATGCCGTAGCAAGTCCAACTGAACTGGCAGAAATGAAAGGTTATTTAACAAATA
TCGTACCTAATTTATCGATTTATGCCAGTTCTCGAGCAAGCGCAAGTGCGACAAACACTAATGCTGACTTCATCGCACAG
ATGAACGGTGTACAGTTTAGTGATATTCCATTTTTTAAAGATACCAACTCTCCACAATATCAGAAGTTAGCAAAATCCAC
GGGGGGCGAATATCAATTGATGCGTTTATATGCAATGGGTGCGGATGCATGGTTGCTCATTAATCAATTTAATGAATTAC
GCCAAGTGCCAGGCTATCGCTTGAGTGGCTTAACAGGGATTTTAAGTGCTGATACCAACTGTAATGTTGAACGCGATATG
ACTTGGTATCAATATCAAGATGGTGCAATTGTACCAGTTGCAAACTAA

Upstream 100 bases:

>100_bases
ATGTATAAAATTCCGGTTAAATCAGTCATTTTTGTTTGCTTTTAAGTTATGAGATAAGTAAGATTTGCTACAACTATTGT
CTGTTTATGATGGAGCAAAG

Downstream 100 bases:

>100_bases
TGTTTTCTTTAAAACGTCAGCAAGGGGCGAGCTTTGAGCATCAAGCTCGCCTTTTTTTAGAATCAAAAGGCTTAACATTT
ATTGCGGCTAATCAAAATTT

Product: D-lactate dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MSILLQGGRFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELEDQQTYKLLAARVLIRENKVE
QSAALLRELGELNDAQKLDRALIEARISAAKNANDVAQNQLRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIE
MDKNLTDVQRRQDNIDKTWALLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATL
FPKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNSVQDIIAQAKQTGIKTLVGPL
LKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNV
RWQQLAGTDANIRYYNLPADVTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLSIYASSRASASATNTNADFIAQ
MNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERDM
TWYQYQDGAIVPVAN

Sequences:

>Translated_575_residues
MSILLQGGRFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELEDQQTYKLLAARVLIRENKVE
QSAALLRELGELNDAQKLDRALIEARISAAKNANDVAQNQLRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIE
MDKNLTDVQRRQDNIDKTWALLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATL
FPKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNSVQDIIAQAKQTGIKTLVGPL
LKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNV
RWQQLAGTDANIRYYNLPADVTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLSIYASSRASASATNTNADFIAQ
MNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERDM
TWYQYQDGAIVPVAN
>Mature_574_residues
SILLQGGRFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELEDQQTYKLLAARVLIRENKVEQ
SAALLRELGELNDAQKLDRALIEARISAAKNANDVAQNQLRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIEM
DKNLTDVQRRQDNIDKTWALLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATLF
PKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNSVQDIIAQAKQTGIKTLVGPLL
KQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVR
WQQLAGTDANIRYYNLPADVTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLSIYASSRASASATNTNADFIAQM
NGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYRLSGLTGILSADTNCNVERDMT
WYQYQDGAIVPVAN

Specific function: Unknown

COG id: COG3107

COG function: function code R; Putative lipoprotein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yraM [H]

Homologues:

Organism=Escherichia coli, GI1789537, Length=336, Percent_Identity=34.2261904761905, Blast_Score=187, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007443 [H]

Pfam domain/function: PF04348 LppC [H]

EC number: NA

Molecular weight: Translated: 63386; Mature: 63255

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILLQGGRFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELE
CCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCCCH
DQQTYKLLAARVLIRENKVEQSAALLRELGELNDAQKLDRALIEARISAAKNANDVAQNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
LRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIEMDKNLTDVQRRQDNIDKTWA
HHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH
LLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATL
HHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHH
FPKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNS
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEHHHHCCCCCCCCCCEEEEEEECCCHHH
VQDIIAQAKQTGIKTLVGPLLKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCC
SPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPAD
CCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCHHCCCHHHHCCCCCCEEEEECCCC
VTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLSIYASSRASASATNTNADFIAQ
EEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHH
MNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYR
CCCCEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCE
LSGLTGILSADTNCNVERDMTWYQYQDGAIVPVAN
ECCCEEEEECCCCCCCCCCCCEEEECCCEEEECCC
>Mature Secondary Structure 
SILLQGGRFKKRLMPILLSMALAGCSNLLGSNFTQTLQKDANASSEFYINKLGQTQELE
CEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCCCH
DQQTYKLLAARVLIRENKVEQSAALLRELGELNDAQKLDRALIEARISAAKNANDVAQNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH
LRALDLNKLSPSQKSRYYETLAIVAENRKDMIEAVKARIEMDKNLTDVQRRQDNIDKTWA
HHHHCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHH
LLRSANTGVINNASDEGNAALGGWLTLIKAYNDYIRQPVQLSQALQSWKNAYPNHAAATL
HHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHH
FPKELLTLLNFQQTNVSQIGLLLPLSGDGQILGTTIQSGFNDAKGNSTIPVQVFDTSMNS
HHHHHHHHHCCCCCCCCCEEEEEEECCCCCEEEHHHHCCCCCCCCCCEEEEEEECCCHHH
VQDIIAQAKQTGIKTLVGPLLKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGL
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCCCCCHHHHHCCC
SPEDEAESAANKMWNDGVRNPLVAMPQNDLGQRVGNAFNVRWQQLAGTDANIRYYNLPAD
CCCHHHHHHHHHHHHCCCCCCEEECCCHHHHHHCCCHHCCCHHHHCCCCCCEEEEECCCC
VTYFVQENNSNTTALYAVASPTELAEMKGYLTNIVPNLSIYASSRASASATNTNADFIAQ
EEEEEEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHH
MNGVQFSDIPFFKDTNSPQYQKLAKSTGGEYQLMRLYAMGADAWLLINQFNELRQVPGYR
CCCCEECCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCE
LSGLTGILSADTNCNVERDMTWYQYQDGAIVPVAN
ECCCEEEEECCCCCCCCCCCCEEEECCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]