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The map label for this gene is tldD [H]

Identifier: 148827076

GI number: 148827076

Start: 344644

End: 346092

Strand: Reverse

Name: tldD [H]

Synonym: CGSHiGG_01945

Alternate gene names: 148827076

Gene position: 346092-344644 (Counterclockwise)

Preceding gene: 148827077

Following gene: 148827074

Centisome position: 18.34

GC content: 41.34

Gene sequence:

>1449_bases
ATGTTAAACCAAGTTTCAAATACATTACTGACACCAAGTAATCTTTCAACTCAAACATTACTCAATATTTTTGACATTAT
ATCGCATCGCAATATTGATTATGCCGATCTGTATTTTCAACTTAGCCAAGATGAAAGTTGGGTATTAGAAGACGGCATTA
TAAAAGAAGGCGGTTTTCATATTGATCGTGGCGTTGGTGTGCGGGCAGTTTCTGGTGAGAAAACGGGGTTTGCTTATGCG
GATCAAATTAATCTTGCTTCTTTGCAGCAATGTGCGGAGGCGGTAAAGGGAATCGCGCAAGTCAAACAGGGGAATTTGAT
TTCGCCATCCGCTTTTAATGTTGTAAATCCTATTGCTCGTTATGCGGCGATTAATCCTTTGGAAAGTTTGACTAAAGAGA
AAAAAATTGAGCTATTACATTTGGTTGATCGTACAGCGCGCGCAGAAGATCATCGTGTAACCAAGGTTTCAGCAAGCCTC
AGTTCCGTTTATGAAGAAGTATTAATTATGGCGACGGATGGCACATTAGCCGCAGATATTCGCCCTTTAGTTCGCTTATC
TATTTCTGTGTTAGTAGAGGAAAATGGAAAACGTGAACGAGGAAGTTATGGTTCTGGTGGGCGTTTCGGTTTAGATTGGT
TCTTTGAAGTTGTTGATGGCGATATTAGAGCAGTACTTTTTGCTAAAGAAGCGGTTCATCAAGCCTTAGTAAACCTTAGT
GCAGTTGCAGCACCCGCAGGATTGATGCCTGTTGTGTTAGGTGCAGGTTGGCCGGGCGTATTGCTACACGAAGCGGTAGG
TCACGGTTTAGAAGGCGATTTTAACCGTAAAGAAAGTTCACTTTTTACAGGCAAGATTGGTGAGCAAGTGACTTCACCGT
TATGTACGATTGTGGATGATGGCACGATTGAAAATCGTCGAGGTTCATTAACTATTGATGATGAAGGTGTGCCAAGCCAG
TGCAATGTACTCATCAAAGATGGCATTTTACAAGGTTATATGCAAGATAAAATGAATGCCCGTTTGATGGGGGTTGCTCC
AACGGGAAATGGACGACGTGAGTCTTATGCCCATTTGCCAATGCCTCGAATGACTAACACCTATATGCTTGCTGGACAAA
GTCAGTTTGATGATTTGATTGCTTCTGTAGAACAGGGCATTTATGCACCGCACTTTGGTGGAGGGCAAGTGGATATTACC
TCTGGTAAATTTGTATTTTCCACTTCAGAAGCTTATTTAATTGAAAAAGGAAAAATCACGAAACCAGTTAAGGGCGCAAC
TTTAATTGGCAGTGGCATTGAAGTGATGCAAAAAATTTCTATGGTTGCAGATAAATCAGAACTTGATTTAGGTATCGGGG
TTTGTGGTAAAGAGGGACAAAGTGTACCTGTTGGCGTAGGACAGCCAGCACTAAAAATTGATGAAATTACTGTTGGTGGA
ACAAATTAA

Upstream 100 bases:

>100_bases
CTCAAAATCAACCGCACTTTATTAATCCGATTTTAATCTGTGCTGTTGTATTAAACGGATACAAGCACTCACAAGATATT
TACTTTAGACTGGAAAAAAT

Downstream 100 bases:

>100_bases
GTCATTGTGTAAAAGATCACAAAAATTCCATTAGAATTGGATTTTTACTGGCAATTTTATTCAAATTTTGATAGCCGCTG
CGAAATTTTATTTCTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MLNQVSNTLLTPSNLSTQTLLNIFDIISHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAYA
DQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARYAAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASL
SSVYEEVLIMATDGTLAADIRPLVRLSISVLVEENGKRERGSYGSGGRFGLDWFFEVVDGDIRAVLFAKEAVHQALVNLS
AVAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDGTIENRRGSLTIDDEGVPSQ
CNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDIT
SGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGG
TN

Sequences:

>Translated_482_residues
MLNQVSNTLLTPSNLSTQTLLNIFDIISHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAYA
DQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARYAAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASL
SSVYEEVLIMATDGTLAADIRPLVRLSISVLVEENGKRERGSYGSGGRFGLDWFFEVVDGDIRAVLFAKEAVHQALVNLS
AVAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDGTIENRRGSLTIDDEGVPSQ
CNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDIT
SGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGG
TN
>Mature_482_residues
MLNQVSNTLLTPSNLSTQTLLNIFDIISHRNIDYADLYFQLSQDESWVLEDGIIKEGGFHIDRGVGVRAVSGEKTGFAYA
DQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIARYAAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASL
SSVYEEVLIMATDGTLAADIRPLVRLSISVLVEENGKRERGSYGSGGRFGLDWFFEVVDGDIRAVLFAKEAVHQALVNLS
AVAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDDGTIENRRGSLTIDDEGVPSQ
CNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLPMPRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDIT
SGKFVFSTSEAYLIEKGKITKPVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGG
TN

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=480, Percent_Identity=66.875, Blast_Score=630, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 51690; Mature: 51690

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNQVSNTLLTPSNLSTQTLLNIFDIISHRNIDYADLYFQLSQDESWVLEDGIIKEGGFH
CCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEECCCCCCCCCEE
IDRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIAR
EECCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
YAAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADI
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHEEEEECCCCCHHHH
RPLVRLSISVLVEENGKRERGSYGSGGRFGLDWFFEVVDGDIRAVLFAKEAVHQALVNLS
HHHHHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHEEHHHHHHHHHHHHHHH
AVAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDD
HHHCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHCCEEEEECC
GTIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLP
CCCCCCCCCEEECCCCCCHHCCEEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCC
MPRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKIT
CCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCEEEEECCCCC
KPVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGG
CCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECC
TN
CC
>Mature Secondary Structure
MLNQVSNTLLTPSNLSTQTLLNIFDIISHRNIDYADLYFQLSQDESWVLEDGIIKEGGFH
CCCCCCCCEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEECCCCCCCCCEE
IDRGVGVRAVSGEKTGFAYADQINLASLQQCAEAVKGIAQVKQGNLISPSAFNVVNPIAR
EECCCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
YAAINPLESLTKEKKIELLHLVDRTARAEDHRVTKVSASLSSVYEEVLIMATDGTLAADI
HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHEEEEECCCCCHHHH
RPLVRLSISVLVEENGKRERGSYGSGGRFGLDWFFEVVDGDIRAVLFAKEAVHQALVNLS
HHHHHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHEEHHHHHHHHHHHHHHH
AVAAPAGLMPVVLGAGWPGVLLHEAVGHGLEGDFNRKESSLFTGKIGEQVTSPLCTIVDD
HHHCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHCCEEEEECC
GTIENRRGSLTIDDEGVPSQCNVLIKDGILQGYMQDKMNARLMGVAPTGNGRRESYAHLP
CCCCCCCCCEEECCCCCCHHCCEEEHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEECCC
MPRMTNTYMLAGQSQFDDLIASVEQGIYAPHFGGGQVDITSGKFVFSTSEAYLIEKGKIT
CCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCEEEEECCCEEEEECCCCC
KPVKGATLIGSGIEVMQKISMVADKSELDLGIGVCGKEGQSVPVGVGQPALKIDEITVGG
CCCCCCEEECCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEECC
TN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]