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The map label for this gene is yohJ [C]

Identifier: 148827007

GI number: 148827007

Start: 250260

End: 250682

Strand: Reverse

Name: yohJ [C]

Synonym: CGSHiGG_01475

Alternate gene names: 148827007

Gene position: 250682-250260 (Counterclockwise)

Preceding gene: 148827013

Following gene: 148827006

Centisome position: 13.28

GC content: 30.5

Gene sequence:

>423_bases
ATGATTCAAAAATTATTTTTATTAGTTCGTTCGTTGGTCATTTTATCTATTATGTTATATCTCGGAAATCTTATTGCTTA
TTACATTCCATCAGGTGTTCCAGGAAGTATTTGGGGATTGTTATTGCTCTTTTTAGGTTTAACAACACGAGTGATTCATT
TAAATTGGATTTATTTAGGCGCAAGTTTGCTAATTCGTTTTATGGCGGTGCTTTTTGTACCAGTGAGCGTGGGAATTATC
AAATATTCTGATTTATTGATAGAGCAAATTAATATTTTGCTTGTTCCTAATATTGTGAGTACTTGTGTCACTTTACTTGT
TATAGGATTTTTAGGTCATTATTTGTATCAGATGCAATCTTTTACACATAAACGCAAAAAAGTAATAAAACGTAGAGAAA
ATCAGGTAAAACAAGCCAATTAG

Upstream 100 bases:

>100_bases
GATCTAAGTCTGGTTATTTTACCGAAAAAATGGCTCAAGTTAGCAAAAAAAAGCGTAAAATAATTTTGAAATATTATGAA
AATAGTTGAAAAGGTTGTAT

Downstream 100 bases:

>100_bases
TATGTTAGGAAAGTTTATATGCAGCAGTACATTATTTATCTTTATACATTTTTAACAATTTTTGGGTTTTGGCTCGCACT
ACAAATTAGCAAACGTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MIQKLFLLVRSLVILSIMLYLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLGASLLIRFMAVLFVPVSVGII
KYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQSFTHKRKKVIKRRENQVKQAN

Sequences:

>Translated_140_residues
MIQKLFLLVRSLVILSIMLYLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLGASLLIRFMAVLFVPVSVGII
KYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQSFTHKRKKVIKRRENQVKQAN
>Mature_140_residues
MIQKLFLLVRSLVILSIMLYLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLGASLLIRFMAVLFVPVSVGII
KYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQSFTHKRKKVIKRRENQVKQAN

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=126, Percent_Identity=35.7142857142857, Blast_Score=80, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 15959; Mature: 15959

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQKLFLLVRSLVILSIMLYLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLIRFMAVLFVPVSVGIIKYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTHKRKKVIKRRENQVKQAN
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIQKLFLLVRSLVILSIMLYLGNLIAYYIPSGVPGSIWGLLLLFLGLTTRVIHLNWIYLG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLLIRFMAVLFVPVSVGIIKYSDLLIEQINILLVPNIVSTCVTLLVIGFLGHYLYQMQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTHKRKKVIKRRENQVKQAN
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA