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The map label for this gene is rpsO

Identifier: 148826972

GI number: 148826972

Start: 211223

End: 211948

Strand: Reverse

Name: rpsO

Synonym: CGSHiGG_01260

Alternate gene names: NA

Gene position: 211948-211223 (Counterclockwise)

Preceding gene: 148826973

Following gene: 148826971

Centisome position: 11.23

GC content: 30.03

Gene sequence:

>726_bases
ATGGTAAATGATGATTTTCAAGAATATGTGAAGCAACTGGTAACAAAACATCGAGATGAACGAATTTATCCTTTTCAATA
TGAAGGAAAAAAATATTGGTTGAAGCAACCTGAAAAATTGAAAGGTATTTGGCTATTATTAAAACCCCATCCTAAAAAAT
CTTTTAAAAATGAATTATATACTTTATTGAAGCTTGCTGAACAAAATGCGCCAGTGCCAAAAGTCTCTTATTATAGTGAT
CATTTTTTTGTTTTAGAGAATGTGGGACTTACCGTATCACAATGGCTATGTAATAAAAATATAGATGAACAACAGAAATT
TTTAATTATTTATGATGCTTGTCTCGCTTTGATTGATTTGCATGCTAAAAATTTGGTGCATGGTCGTCCTGCTATTCGAG
ATATTACTTGGGATAAAGGGAAAGTTACTTTTCTTGATTTTGAATCTCGTTCAAATAGCCGAAATCAAAATTGGGTAGTT
ATTCGGGATATGTTATTTTTCTTTGATAGTTTATGTCGAGAAGAAGATATTTCGGACACTTTTATTCAAAAAGTAGCGTC
GTATTATCAAACACATTGTGAAGCGAAAAATTGGCAAAATATGATCGTATTTTTGCAACGTTTTAGCTGGGTTTATTATC
TTTTATTGCCTTTTAAACCTATTGCAAAGACAGATTTAATTTCGATTTATCGCTTATTTGAAATTTTCTTGATAAAGAAA
AAATGA

Upstream 100 bases:

>100_bases
ATAAAGTTTATTTTAAAGTTTTTAATAAACGTTATTATAGAAAATATTAAATTAATTTCTATTTAAATTATAAATAATAT
ACTAAAGTAGTGGGAATATG

Downstream 100 bases:

>100_bases
TGAAGAAAATATTTTTTATTTTTGCATTATCAGGCATATTAGCTGCTTGTACTGTGGGTGGTGTTAGTGCTGGTGGTGGA
AGTAATGGTGTAGGATTAGG

Product: 30S ribosomal protein S15

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MVNDDFQEYVKQLVTKHRDERIYPFQYEGKKYWLKQPEKLKGIWLLLKPHPKKSFKNELYTLLKLAEQNAPVPKVSYYSD
HFFVLENVGLTVSQWLCNKNIDEQQKFLIIYDACLALIDLHAKNLVHGRPAIRDITWDKGKVTFLDFESRSNSRNQNWVV
IRDMLFFFDSLCREEDISDTFIQKVASYYQTHCEAKNWQNMIVFLQRFSWVYYLLLPFKPIAKTDLISIYRLFEIFLIKK
K

Sequences:

>Translated_241_residues
MVNDDFQEYVKQLVTKHRDERIYPFQYEGKKYWLKQPEKLKGIWLLLKPHPKKSFKNELYTLLKLAEQNAPVPKVSYYSD
HFFVLENVGLTVSQWLCNKNIDEQQKFLIIYDACLALIDLHAKNLVHGRPAIRDITWDKGKVTFLDFESRSNSRNQNWVV
IRDMLFFFDSLCREEDISDTFIQKVASYYQTHCEAKNWQNMIVFLQRFSWVYYLLLPFKPIAKTDLISIYRLFEIFLIKK
K
>Mature_241_residues
MVNDDFQEYVKQLVTKHRDERIYPFQYEGKKYWLKQPEKLKGIWLLLKPHPKKSFKNELYTLLKLAEQNAPVPKVSYYSD
HFFVLENVGLTVSQWLCNKNIDEQQKFLIIYDACLALIDLHAKNLVHGRPAIRDITWDKGKVTFLDFESRSNSRNQNWVV
IRDMLFFFDSLCREEDISDTFIQKVASYYQTHCEAKNWQNMIVFLQRFSWVYYLLLPFKPIAKTDLISIYRLFEIFLIKK
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29012; Mature: 29012

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNDDFQEYVKQLVTKHRDERIYPFQYEGKKYWLKQPEKLKGIWLLLKPHPKKSFKNELY
CCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEECCCCCCCCCEEEEECCCCCHHHHHHHH
TLLKLAEQNAPVPKVSYYSDHFFVLENVGLTVSQWLCNKNIDEQQKFLIIYDACLALIDL
HHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHHHHHCCCCCCHHHEEHHHHHHHHHHHH
HAKNLVHGRPAIRDITWDKGKVTFLDFESRSNSRNQNWVVIRDMLFFFDSLCREEDISDT
HHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHH
FIQKVASYYQTHCEAKNWQNMIVFLQRFSWVYYLLLPFKPIAKTDLISIYRLFEIFLIKK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
K
C
>Mature Secondary Structure
MVNDDFQEYVKQLVTKHRDERIYPFQYEGKKYWLKQPEKLKGIWLLLKPHPKKSFKNELY
CCCHHHHHHHHHHHHHCCCCCCCCEEECCCEEECCCCCCCCCEEEEECCCCCHHHHHHHH
TLLKLAEQNAPVPKVSYYSDHFFVLENVGLTVSQWLCNKNIDEQQKFLIIYDACLALIDL
HHHHHHHCCCCCCEEEECCCCEEEEECCCCHHHHHHHCCCCCCHHHEEHHHHHHHHHHHH
HAKNLVHGRPAIRDITWDKGKVTFLDFESRSNSRNQNWVVIRDMLFFFDSLCREEDISDT
HHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCHHH
FIQKVASYYQTHCEAKNWQNMIVFLQRFSWVYYLLLPFKPIAKTDLISIYRLFEIFLIKK
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]