Click here to switch to the map view.

The map label for this gene is ydfG [C]

Identifier: 148826930

GI number: 148826930

Start: 176472

End: 177182

Strand: Direct

Name: ydfG [C]

Synonym: CGSHiGG_01020

Alternate gene names: 148826930

Gene position: 176472-177182 (Clockwise)

Preceding gene: 148826927

Following gene: 148826931

Centisome position: 9.35

GC content: 41.35

Gene sequence:

>711_bases
TTGGCAATCTGTAAAAAATTGATCGAAGCAGGCTATAAAGTGATTGGCACGGGCAGACGTGCAGATCGATTAGCAGAAAT
CCATTCACAATTGGGCAATAATTTTCTACCGCTTGCCTTTGACATTCGTGATGAACAAGCCACAATTAACGCTCTAAATA
CCCTTCCTGAAGGCTGGCAAGCGGTCGATTTATTAGTGAATAATGCAGGTTTAGCCTTGGGATTAGAGCCGGCACATAAA
GCGGATTTACAAGATTGGTATCAGATGATTGATACCAACATCAAAGGATTGGTTACTATCACTCGCCTTGTGTTGCCAAA
TATGGTGGCTCGTAATTACGGGCAGATTATCAATTTGAGTTCAATTGCAGGTACTTATCCTTATGCAGGCAGTAATGTAT
ATGGTGGAACTGAAGCTTTTGTCACACAATTTAGCTTAAATTTACGAGCCGATCTGGCAGGCACAAAAATTCGAGTAAGC
AATGTTGAACCGGGTTTATGTGGCGGTACGGAGTTCTCTAATGTGCGTTTTCACGGCGATGATGAAAGAGCCGCAAAAGT
CTATGAAAACGTGCAATCGGTTCAGCCTGAAGATATTGCGAACATTGTATTATGGCTTCATCAACAACCTGAACACGTGA
ACATTAATCGTATTGAAGTAATGCCAACCGCTCAATCTTTTGCAGGAATGAGCGTTTCAAAAGAAAAATAA

Upstream 100 bases:

>100_bases
TTATTTGTACTACTTTAATAGTACAAATAAGTTCAAGATTTAGGAGAAAAAATAGAAAACTACTACTGCATTAGTTACAG
GTGCAACCGCAGGCTTTGGC

Downstream 100 bases:

>100_bases
AATAATAGGAAAAAATATGTCAGACACACTTCTTAACCCTTATTTTGGCGAATTTGGCGGAATGTATGTACCCGAAATTT
TAGTGCCTGTTTTAAAGCAA

Product: phosphoribosylaminoimidazole synthetase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MAICKKLIEAGYKVIGTGRRADRLAEIHSQLGNNFLPLAFDIRDEQATINALNTLPEGWQAVDLLVNNAGLALGLEPAHK
ADLQDWYQMIDTNIKGLVTITRLVLPNMVARNYGQIINLSSIAGTYPYAGSNVYGGTEAFVTQFSLNLRADLAGTKIRVS
NVEPGLCGGTEFSNVRFHGDDERAAKVYENVQSVQPEDIANIVLWLHQQPEHVNINRIEVMPTAQSFAGMSVSKEK

Sequences:

>Translated_236_residues
MAICKKLIEAGYKVIGTGRRADRLAEIHSQLGNNFLPLAFDIRDEQATINALNTLPEGWQAVDLLVNNAGLALGLEPAHK
ADLQDWYQMIDTNIKGLVTITRLVLPNMVARNYGQIINLSSIAGTYPYAGSNVYGGTEAFVTQFSLNLRADLAGTKIRVS
NVEPGLCGGTEFSNVRFHGDDERAAKVYENVQSVQPEDIANIVLWLHQQPEHVNINRIEVMPTAQSFAGMSVSKEK
>Mature_235_residues
AICKKLIEAGYKVIGTGRRADRLAEIHSQLGNNFLPLAFDIRDEQATINALNTLPEGWQAVDLLVNNAGLALGLEPAHKA
DLQDWYQMIDTNIKGLVTITRLVLPNMVARNYGQIINLSSIAGTYPYAGSNVYGGTEAFVTQFSLNLRADLAGTKIRVSN
VEPGLCGGTEFSNVRFHGDDERAAKVYENVQSVQPEDIANIVLWLHQQPEHVNINRIEVMPTAQSFAGMSVSKEK

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=235, Percent_Identity=28.936170212766, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI7705855, Length=179, Percent_Identity=28.4916201117318, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI157739938, Length=162, Percent_Identity=26.5432098765432, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787820, Length=234, Percent_Identity=56.4102564102564, Blast_Score=288, Evalue=3e-79,
Organism=Escherichia coli, GI1787335, Length=208, Percent_Identity=29.3269230769231, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI87082100, Length=146, Percent_Identity=32.8767123287671, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=227, Percent_Identity=28.1938325991189, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71994600, Length=179, Percent_Identity=26.8156424581006, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=178, Percent_Identity=27.5280898876405, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=229, Percent_Identity=27.0742358078603, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=221, Percent_Identity=26.2443438914027, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17562908, Length=214, Percent_Identity=28.9719626168224, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=218, Percent_Identity=27.5229357798165, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=220, Percent_Identity=28.6363636363636, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=220, Percent_Identity=25.4545454545455, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=220, Percent_Identity=27.2727272727273, Blast_Score=65, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17560150, Length=215, Percent_Identity=28.3720930232558, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=226, Percent_Identity=25.6637168141593, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=220, Percent_Identity=34.0909090909091, Blast_Score=128, Evalue=8e-31,
Organism=Drosophila melanogaster, GI281364494, Length=240, Percent_Identity=26.6666666666667, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI116007236, Length=240, Percent_Identity=27.0833333333333, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24641232, Length=242, Percent_Identity=28.099173553719, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24641388, Length=239, Percent_Identity=27.1966527196653, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24643142, Length=163, Percent_Identity=31.9018404907975, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI116007234, Length=240, Percent_Identity=27.5, Blast_Score=74, Evalue=9e-14,
Organism=Drosophila melanogaster, GI23397609, Length=106, Percent_Identity=34.9056603773585, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI28571387, Length=241, Percent_Identity=26.9709543568465, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI21357041, Length=153, Percent_Identity=31.3725490196078, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24648693, Length=241, Percent_Identity=25.3112033195021, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI21355889, Length=241, Percent_Identity=25.3112033195021, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24640442, Length=185, Percent_Identity=29.1891891891892, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI21358495, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24663911, Length=239, Percent_Identity=25.5230125523013, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28571526, Length=192, Percent_Identity=27.0833333333333, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: 1300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25909; Mature: 25778

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAICKKLIEAGYKVIGTGRRADRLAEIHSQLGNNFLPLAFDIRDEQATINALNTLPEGWQ
CHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCHH
AVDLLVNNAGLALGLEPAHKADLQDWYQMIDTNIKGLVTITRLVLPNMVARNYGQIINLS
EEHHEECCCCEEEECCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEH
SIAGTYPYAGSNVYGGTEAFVTQFSLNLRADLAGTKIRVSNVEPGLCGGTEFSNVRFHGD
HHCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEECC
DERAAKVYENVQSVQPEDIANIVLWLHQQPEHVNINRIEVMPTAQSFAGMSVSKEK
HHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCEEEEEEECHHHHCCCCCCCCC
>Mature Secondary Structure 
AICKKLIEAGYKVIGTGRRADRLAEIHSQLGNNFLPLAFDIRDEQATINALNTLPEGWQ
HHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCHH
AVDLLVNNAGLALGLEPAHKADLQDWYQMIDTNIKGLVTITRLVLPNMVARNYGQIINLS
EEHHEECCCCEEEECCCHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEH
SIAGTYPYAGSNVYGGTEAFVTQFSLNLRADLAGTKIRVSNVEPGLCGGTEFSNVRFHGD
HHCCCCCCCCCCCCCCHHHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEECC
DERAAKVYENVQSVQPEDIANIVLWLHQQPEHVNINRIEVMPTAQSFAGMSVSKEK
HHHHHHHHHHHHHCCHHHHHHHHHHEECCCCCCCCEEEEEEECHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]