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The map label for this gene is ninB [H]

Identifier: 148826902

GI number: 148826902

Start: 159615

End: 159983

Strand: Reverse

Name: ninB [H]

Synonym: CGSHiGG_00880

Alternate gene names: 148826902

Gene position: 159983-159615 (Counterclockwise)

Preceding gene: 148826903

Following gene: 148826901

Centisome position: 8.48

GC content: 43.63

Gene sequence:

>369_bases
TTGCTTGGATTTAATCAAGGAACTGCAACGGACGATAAAAAGCCGTTGGTCGTAAAAATCCAAGCGATAACACGAAACCT
TGAGCAAAACGCCAAGTTTCACGCTATGTGCCAAGATGTTGCAAATCAGGCTGAATTTATGGGGCGTAAGCTCACAATGG
AGCAATGGAAGGTATTGTTCATTTCGGGTCACGCAATCGCCACAAATCAAAAAGCAGATGTTGTGCCAGGTCTTGAGGGT
GAATTTGTGAATATCCGTGAAAGTTCAGCTCAAATGAGCATATCACGAATGGCGAGCCTTATCGAGTATGTCACGGCTTA
CGGCGTTGCTAACGGGGTTAAATTTAACGATAGATGGGGATTTAAATGA

Upstream 100 bases:

>100_bases
AGTACAAAGAATGAGTATTGCGATGTTATTCAAGCGTTGGGAATGATGTGATGAGCCAATACAAACCTTTCTTTTTACGT
GATCAACGCATTAAAAATAA

Downstream 100 bases:

>100_bases
AACGCTTAAACGATGATGAGATTTTAGAGTTAAAAATTGTACTTTGTATTGCGGCAGTTTGGGTGATGTTTAATATGGTG
TTTGGCTAATGGCGAAAGAG

Product: putative recombination protein NinB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MLGFNQGTATDDKKPLVVKIQAITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEG
EFVNIRESSAQMSISRMASLIEYVTAYGVANGVKFNDRWGFK

Sequences:

>Translated_122_residues
MLGFNQGTATDDKKPLVVKIQAITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEG
EFVNIRESSAQMSISRMASLIEYVTAYGVANGVKFNDRWGFK
>Mature_122_residues
MLGFNQGTATDDKKPLVVKIQAITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLFISGHAIATNQKADVVPGLEG
EFVNIRESSAQMSISRMASLIEYVTAYGVANGVKFNDRWGFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ninB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008711 [H]

Pfam domain/function: PF05772 NinB [H]

EC number: NA

Molecular weight: Translated: 13600; Mature: 13600

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGFNQGTATDDKKPLVVKIQAITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLF
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
ISGHAIATNQKADVVPGLEGEFVNIRESSAQMSISRMASLIEYVTAYGVANGVKFNDRWG
EECCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC
FK
CC
>Mature Secondary Structure
MLGFNQGTATDDKKPLVVKIQAITRNLEQNAKFHAMCQDVANQAEFMGRKLTMEQWKVLF
CCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
ISGHAIATNQKADVVPGLEGEFVNIRESSAQMSISRMASLIEYVTAYGVANGVKFNDRWG
EECCEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC
FK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]