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The map label for this gene is gspD [C]

Identifier: 148826860

GI number: 148826860

Start: 122053

End: 123186

Strand: Direct

Name: gspD [C]

Synonym: CGSHiGG_00650

Alternate gene names: 148826860

Gene position: 122053-123186 (Clockwise)

Preceding gene: 148826859

Following gene: 148826867

Centisome position: 6.47

GC content: 35.19

Gene sequence:

>1134_bases
ATGAGAGCTTTTTTATTTATGGTTTTATTATTTTTAGGAGCGCAATCTTGGGCGAAGAATGTTGATTTTAAGCTTGAGGC
GGTGCCTTTACCTAAGGCGGTTTCAGTTATTTATGATGAAGTGTTAAATAAGCCTTATATGTTGGATCCAAAACTAGCGG
AAGATAAACGTTTATTAAGCTTTCATACTACTGAAGAACAAGATTTCAATGAGTTCTTAACGCGTTATTTTGAGAATATT
AATATAAAGGTGTATGAGAAAAAAGGCGTTGTGTATCTTGCTCATATTGAGTCTCAACCTAAAAAAGTGATGAAAAATAG
CTTTGTTTATAGTCCGATTTATCGTGATACTGAATACTTGTCGCAGTTTTTAAAAGATGAAGAAGGCGCGGTATCAGCAA
GCGGTGATAAGTTGGTTTATTATGGTAAAACAGAAGATATTGCACGAGTAAAATCTGTTTTAAAAGGTGTCGATGTACCA
AGTCGTGAGGTTGTTGTAACAGGCTATGTTTTTGAAGTACAAACAGAAGAAAAAGAGGGAAGTGGAATTAATTTATTGGC
GAAACTGCTTTCAGGTAAGCTTGGTATTAATATTGGCGTTAAACAAAATTATGAAAACTTTATCACGGTAAATACGGGAA
ATTTAGATGCTATGATTGAGTTATTTCGTACAGATAGTCGCTTTCATGTTGTAAGTTCGCCAACGCTTAGAGTTAAATCA
GGCTCAAAAGGTAATTTTTCAGTTGGGTCTGATGTGCCGGTATTGGGTGCCGTGACATATGATAGAGACGGTAGAGCCGT
GCAATCAATCGAATATCGTTCAAGCGGTGTGATTTTTGATATTCAACCTACAATTAAAAATAACGCTATAGATTTGAAAA
TCAATCAACAGTTATCTAATTTTGTGAAGACTGACACGGGCGTTAATCAGTCACCGACCTTAATAAAACGCGACATTGTC
ACAGATGTAACGTTAAAAAGTGGGGATATTGTTGTGCTAGGTGGTTTGGCTGAAAATAAGATAACAGAAGGGGAAACAGG
GTTTAGTTTTTTACCTAAAGGCATTTTAAGCGGCCGTTCAAAATCAAATTCAAAGACTGATATTGTCATTCTTTTACAAG
TAAAAGAAATTTAA

Upstream 100 bases:

>100_bases
GGTTGCGATTTGAACCACGTTCGAGTTTTAGTTATAGCGGTCGTATGTTAGAAGGTTTGATTGATGGGGAAGTCGTGAAT
TATTATTCGGGGGCAATGCA

Downstream 100 bases:

>100_bases
GCGTAGGAAATAAAAATCCCGCCCGCAGTTTAACGAGGACGGGATTTTTATTTCTGTCGAGTGTAATTATTTTCCGCTTG
CGGAAAATGGAAGGCAAAAC

Product: putative phage-like secreted protein

Products: NA

Alternate protein names: Type II And III Secretion System Protein; Phage-Related Secreted Protein; General D Protein; Type II Secretory Pathway Component PulD; Type II Secretory Pathway Subunit EpsD; Type II Secretory Pathway Component PulD-Like Protein; Type II And III Secretion System ProteinNolW-Like; Type II/III Secretion System Protein; Bacteriophage-Related Lipoprotein; Type II Secretory Pathway Component HofQ; Type II Secretion System Protein; PulD Family Bacteriophage Secretion Protein

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRAFLFMVLLFLGAQSWAKNVDFKLEAVPLPKAVSVIYDEVLNKPYMLDPKLAEDKRLLSFHTTEEQDFNEFLTRYFENI
NIKVYEKKGVVYLAHIESQPKKVMKNSFVYSPIYRDTEYLSQFLKDEEGAVSASGDKLVYYGKTEDIARVKSVLKGVDVP
SREVVVTGYVFEVQTEEKEGSGINLLAKLLSGKLGINIGVKQNYENFITVNTGNLDAMIELFRTDSRFHVVSSPTLRVKS
GSKGNFSVGSDVPVLGAVTYDRDGRAVQSIEYRSSGVIFDIQPTIKNNAIDLKINQQLSNFVKTDTGVNQSPTLIKRDIV
TDVTLKSGDIVVLGGLAENKITEGETGFSFLPKGILSGRSKSNSKTDIVILLQVKEI

Sequences:

>Translated_377_residues
MRAFLFMVLLFLGAQSWAKNVDFKLEAVPLPKAVSVIYDEVLNKPYMLDPKLAEDKRLLSFHTTEEQDFNEFLTRYFENI
NIKVYEKKGVVYLAHIESQPKKVMKNSFVYSPIYRDTEYLSQFLKDEEGAVSASGDKLVYYGKTEDIARVKSVLKGVDVP
SREVVVTGYVFEVQTEEKEGSGINLLAKLLSGKLGINIGVKQNYENFITVNTGNLDAMIELFRTDSRFHVVSSPTLRVKS
GSKGNFSVGSDVPVLGAVTYDRDGRAVQSIEYRSSGVIFDIQPTIKNNAIDLKINQQLSNFVKTDTGVNQSPTLIKRDIV
TDVTLKSGDIVVLGGLAENKITEGETGFSFLPKGILSGRSKSNSKTDIVILLQVKEI
>Mature_377_residues
MRAFLFMVLLFLGAQSWAKNVDFKLEAVPLPKAVSVIYDEVLNKPYMLDPKLAEDKRLLSFHTTEEQDFNEFLTRYFENI
NIKVYEKKGVVYLAHIESQPKKVMKNSFVYSPIYRDTEYLSQFLKDEEGAVSASGDKLVYYGKTEDIARVKSVLKGVDVP
SREVVVTGYVFEVQTEEKEGSGINLLAKLLSGKLGINIGVKQNYENFITVNTGNLDAMIELFRTDSRFHVVSSPTLRVKS
GSKGNFSVGSDVPVLGAVTYDRDGRAVQSIEYRSSGVIFDIQPTIKNNAIDLKINQQLSNFVKTDTGVNQSPTLIKRDIV
TDVTLKSGDIVVLGGLAENKITEGETGFSFLPKGILSGRSKSNSKTDIVILLQVKEI

Specific function: Involved In A General Secretion Pathway (Gsp) For The Export Of Proteins (By Similarity). [C]

COG id: COG1450

COG function: function code NU; Type II secretory pathway, component PulD

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41982; Mature: 41982

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFLFMVLLFLGAQSWAKNVDFKLEAVPLPKAVSVIYDEVLNKPYMLDPKLAEDKRLLS
CHHHHHHHHHHHCCHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCEEEE
FHTTEEQDFNEFLTRYFENINIKVYEKKGVVYLAHIESQPKKVMKNSFVYSPIYRDTEYL
EECCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHCCCEECCCCCCHHHH
SQFLKDEEGAVSASGDKLVYYGKTEDIARVKSVLKGVDVPSREVVVTGYVFEVQTEEKEG
HHHHCCCCCCEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCC
SGINLLAKLLSGKLGINIGVKQNYENFITVNTGNLDAMIELFRTDSRFHVVSSPTLRVKS
CCHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCEEEEECCCEEEEEC
GSKGNFSVGSDVPVLGAVTYDRDGRAVQSIEYRSSGVIFDIQPTIKNNAIDLKINQQLSN
CCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEHHHHHH
FVKTDTGVNQSPTLIKRDIVTDVTLKSGDIVVLGGLAENKITEGETGFSFLPKGILSGRS
HHHCCCCCCCCCCCEEHHHEEEEEECCCCEEEECCCCCCCCCCCCCCHHHCCHHHHCCCC
KSNSKTDIVILLQVKEI
CCCCCCEEEEEEEEECC
>Mature Secondary Structure
MRAFLFMVLLFLGAQSWAKNVDFKLEAVPLPKAVSVIYDEVLNKPYMLDPKLAEDKRLLS
CHHHHHHHHHHHCCHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCEEEE
FHTTEEQDFNEFLTRYFENINIKVYEKKGVVYLAHIESQPKKVMKNSFVYSPIYRDTEYL
EECCCHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHCCCEECCCCCCHHHH
SQFLKDEEGAVSASGDKLVYYGKTEDIARVKSVLKGVDVPSREVVVTGYVFEVQTEEKEG
HHHHCCCCCCEECCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCC
SGINLLAKLLSGKLGINIGVKQNYENFITVNTGNLDAMIELFRTDSRFHVVSSPTLRVKS
CCHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCHHHHHHHHHCCCEEEEECCCEEEEEC
GSKGNFSVGSDVPVLGAVTYDRDGRAVQSIEYRSSGVIFDIQPTIKNNAIDLKINQQLSN
CCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECCCCCCCEEEEEEHHHHHH
FVKTDTGVNQSPTLIKRDIVTDVTLKSGDIVVLGGLAENKITEGETGFSFLPKGILSGRS
HHHCCCCCCCCCCCEEHHHEEEEEECCCCEEEECCCCCCCCCCCCCCHHHCCHHHHCCCC
KSNSKTDIVILLQVKEI
CCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA