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The map label for this gene is glpX [H]

Identifier: 148826708

GI number: 148826708

Start: 1760649

End: 1761200

Strand: Direct

Name: glpX [H]

Synonym: CGSHiEE_08915

Alternate gene names: 148826708

Gene position: 1760649-1761200 (Clockwise)

Preceding gene: 148826707

Following gene: 148826709

Centisome position: 97.11

GC content: 43.66

Gene sequence:

>552_bases
ATGAATAGAGAACAAATCGCCAACGCACTTCGACAAAATCAAGTGGTCGCTTATCCCACTGAAGCTGTGTTTGGCTTGGG
CTGTAATCCGCAAAGTGAAAGTGCGGTAAAAAAATTACTTGATTTGAAGCAACGTCCAGTGGAAAAAGGGCTGATTTTAG
TGGCACCTAGCTTGGATTTTTTCCGTCCTTTTGTTGATTTTGAACAGATTAACGATGAACAGCTTTCTCGCCTGCAAGGT
AAATATGAACGTCCAACGACTTGGATTGTGCCATCTAAATCGACCACCCCGTATTTTCTCACAGGCAAATTTGATAGCAT
CGCAGTACGTTTGTGCGATCATCCTTCCGTAAAAGCCTTATGTGAACTCACGGGTTTTGCATTAACTTCAACCAGCGCAA
ATCTGACAGGAGAGCCACCTTGTCGCATCGCCGATGAAGTGCGGTTACAATTCGGTGCAGATTTTCCAGTATTAGATGAA
ACTGTGGGAGATGCACGCAATCCATCGGAAATTCGAGACTTACGCACAAATCAACTTTTTAGACAGGGATAA

Upstream 100 bases:

>100_bases
ACTTTCTTTGTTAAAAAGTGAAGATGGGGAAAAACAAATTTTCCAGTGTGCAAATAAAACTTGCCGTCATATTTTTGAGC
AATAAAAGTAAAAGAGTTAA

Downstream 100 bases:

>100_bases
TTTATGGATCTTTATGCTGTGTGGGGCAATCCGATTACGCAAAGTAAATCGCCATTAATTCAAAATAAGTTAGCAGCGCA
AACCCATCAAACTATGGAAT

Product: fructose 1,6-bisphosphatase II

Products: NA

Alternate protein names: t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MNREQIANALRQNQVVAYPTEAVFGLGCNPQSESAVKKLLDLKQRPVEKGLILVAPSLDFFRPFVDFEQINDEQLSRLQG
KYERPTTWIVPSKSTTPYFLTGKFDSIAVRLCDHPSVKALCELTGFALTSTSANLTGEPPCRIADEVRLQFGADFPVLDE
TVGDARNPSEIRDLRTNQLFRQG

Sequences:

>Translated_183_residues
MNREQIANALRQNQVVAYPTEAVFGLGCNPQSESAVKKLLDLKQRPVEKGLILVAPSLDFFRPFVDFEQINDEQLSRLQG
KYERPTTWIVPSKSTTPYFLTGKFDSIAVRLCDHPSVKALCELTGFALTSTSANLTGEPPCRIADEVRLQFGADFPVLDE
TVGDARNPSEIRDLRTNQLFRQG
>Mature_183_residues
MNREQIANALRQNQVVAYPTEAVFGLGCNPQSESAVKKLLDLKQRPVEKGLILVAPSLDFFRPFVDFEQINDEQLSRLQG
KYERPTTWIVPSKSTTPYFLTGKFDSIAVRLCDHPSVKALCELTGFALTSTSANLTGEPPCRIADEVRLQFGADFPVLDE
TVGDARNPSEIRDLRTNQLFRQG

Specific function: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine [H]

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI2367210, Length=186, Percent_Identity=53.763440860215, Blast_Score=203, Evalue=4e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR006070 [H]

Pfam domain/function: PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 20459; Mature: 20459

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNREQIANALRQNQVVAYPTEAVFGLGCNPQSESAVKKLLDLKQRPVEKGLILVAPSLDF
CCHHHHHHHHHHCCEEEECCHHEEECCCCCCHHHHHHHHHHHHHCHHHCCEEEEECCHHH
FRPFVDFEQINDEQLSRLQGKYERPTTWIVPSKSTTPYFLTGKFDSIAVRLCDHPSVKAL
HHHHHCHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECCCCCHHHH
CELTGFALTSTSANLTGEPPCRIADEVRLQFGADFPVLDETVGDARNPSEIRDLRTNQLF
HHHHHHEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH
RQG
HCC
>Mature Secondary Structure
MNREQIANALRQNQVVAYPTEAVFGLGCNPQSESAVKKLLDLKQRPVEKGLILVAPSLDF
CCHHHHHHHHHHCCEEEECCHHEEECCCCCCHHHHHHHHHHHHHCHHHCCEEEEECCHHH
FRPFVDFEQINDEQLSRLQGKYERPTTWIVPSKSTTPYFLTGKFDSIAVRLCDHPSVKAL
HHHHHCHHHCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCEEEEEECCCCCHHHH
CELTGFALTSTSANLTGEPPCRIADEVRLQFGADFPVLDETVGDARNPSEIRDLRTNQLF
HHHHHHEEECCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHH
RQG
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA