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The map label for this gene is 148826695

Identifier: 148826695

GI number: 148826695

Start: 1748233

End: 1748541

Strand: Direct

Name: 148826695

Synonym: CGSHiEE_08850

Alternate gene names: NA

Gene position: 1748233-1748541 (Clockwise)

Preceding gene: 148826691

Following gene: 148826696

Centisome position: 96.43

GC content: 36.57

Gene sequence:

>309_bases
ATGAATAACCTTAGTGCACAATTAGAAAATCAAATTGATGAATTAAAAAAGCTTCAGAAATCAGTCATTACCTATGAACA
AGCGCAAAGACAACAACTTTACGCAGGGAAAATTACCGATCTCAAAGCATTTGGAAAAATGCTCAATGATAAGCGTAAAT
CACTTGGTATTGAGCTTAGTATGCTAGAACTGCAAACTGGCGTGTCTATTTCTACCTTGAATCGCTTATTTCAAGATCCA
AGCCAAGTGAGATTTACAACCGTGTTTCTTGTTGCTCAAACATTAGGGGTTTCACTATGCGCGATTTAG

Upstream 100 bases:

>100_bases
TCCTAAAATTTTTTTCCTAAAAAAATCAAAAAAGATATTCAAAAAAGCGAAAACCCATATATGATATAAAAATATTTTAT
TAAAAGAAAAAGTATCAAAT

Downstream 100 bases:

>100_bases
TCCGCTCGGGAAAAGTATTTCTCTACGGCGAATTTATTGGCTTACTTAGAGAAGATCATCGTGGTTTTCATTTTGCTTAC
AATCCCGATTATCAAGGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MNNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELSMLELQTGVSISTLNRLFQDP
SQVRFTTVFLVAQTLGVSLCAI

Sequences:

>Translated_102_residues
MNNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELSMLELQTGVSISTLNRLFQDP
SQVRFTTVFLVAQTLGVSLCAI
>Mature_102_residues
MNNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELSMLELQTGVSISTLNRLFQDP
SQVRFTTVFLVAQTLGVSLCAI

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 11464; Mature: 11464

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
MLELQTGVSISTLNRLFQDPSQVRFTTVFLVAQTLGVSLCAI
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNLSAQLENQIDELKKLQKSVITYEQAQRQQLYAGKITDLKAFGKMLNDKRKSLGIELS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
MLELQTGVSISTLNRLFQDPSQVRFTTVFLVAQTLGVSLCAI
HHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]