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The map label for this gene is ytfM [C]

Identifier: 148826659

GI number: 148826659

Start: 1709242

End: 1710978

Strand: Direct

Name: ytfM [C]

Synonym: CGSHiEE_08650

Alternate gene names: 148826659

Gene position: 1709242-1710978 (Clockwise)

Preceding gene: 148826658

Following gene: 148826660

Centisome position: 94.28

GC content: 39.84

Gene sequence:

>1737_bases
ATGAAGAAAAAATCGCTAAAACTCACCGCACTTTTTTTAGCATTAAGTTGCTTTCCCGCATTTGCTGAACAAACTGTTGA
TATTGAAGTTCAAGGCATTCGTGGTTTCCGTGCTGTGCGTAATACAGATCTCAATGTTAATTTGATTAATAAAGAAGAAA
TGGATGGCTCCGAACGCTATCAACATTTGGTAACCAAAGCCGTGGATCGTGGTTTGCGTGTGTTTGGTTATTATGAATCT
TCCGTGCGTTTTGAACGAAAACAGCGTCAAGGCAAACGCGATTTATTGATTGCTCATGTTACACCAGGCGAGCCAACAAA
AATTGCGGGGACTGATGTGCAAATTGAGGGGGAAGCCGCACAAGATGAAAATTTTAATGCATTGCGTAAAAACTTACCGA
AAGATGGCGTTTTGGTTGAGCACCAAACTTACGATGATTACAAAACAGCGATTTCACGCTTGGCATTAAATCGTGGGTAT
TTTGATGGGAACTTTAAAATTTCACGTTTAGAAATCAGCCCTGAAACCCATCAAGCATGGTGGCGAATGTTATTTGATAG
TGGTGTCCGTTATCATTATGGCAATATTACTTTTAGCCATTCACAAATTCGGGATGATTACTTAAATAATATTCTTAACA
TCAAATCTGGTGATCCGTATTTAATGAATAATTTGTCGGATTTAACCAGCGATTTTTCATCTTCAAATTGGTTTAGCTCA
GTATTAGTTCAGCCTAATATCAATCATAAAAGTAAAACGGTAGATATAGAAATCATTCTTTATCCACGTAAAAAAAATGC
GATGGAACTCGGTGTGGGCTTTGCTACTGATGGCGGCGTTCACGGACAAATAGGCTGGACAAAACCTTGGATTAATAGCC
GTGGACATAGTTTGCGTTCAAATCTTTATCTCTCTGCACCAAAACAAACTCTAGAGGCAACTTATCGAATACCGTTGCTG
AAAAATCCATTAAATTATTACTATGATTTTGCCGTCGGTTGGGAAGGGGAAAAAGAGAACGATACCAATACGAGAGCACT
TACGTTGTCAGCGTTACGTTATTGGAATAATGCGCATGGTTGGCAATATTTTGGCGGACTTCGTACGCGATACGACAGTT
TTACACAAGCGGATATCACTGATAAAACCTTACTTCTTTATCCAACTGTTGGATTTACTCGTACTCGATTACGTGGTGGT
TCCTTTGCCACTTGGGGCGATGTGCAAAAAATTACTTTTGATTTAAGCAAACGAATTTGGCTATCAGAATCTTCTTTTAT
AAAAGTGCAAGCATCAAGCGCGTGGATTCGTACTTATGCAGAAAATCATCGTATCGTTGCTCGTGCTGAAATCGGGTATT
TACATACAAAAGATATTGAAAAAATTCCGCCTACACTGCGTTTCTTTGCTGGCGGCGATCGTAGTGTACGCGGTTATGGC
TATAAAAAAATTGCGCCTAAAAATAAAAATGGGAAATTGGTGGGTGGCTCACGTTTGCTGACAGGTTCTTTAGAATATCA
ATATCAAGTTTATCCGAATTGGTGGGCGGCAACCTTCGCAGATAGCGGATTAGCAGCCAATGATTACACAGCAAAAGAGC
TGCGTTATGGCGCAGGCGTTGGTGTGCGTTGGGCATCCCCAGTGGGCGCGATTAAATTTGATATTGCCACACCCATTCGC
GATAAAGATAACAGCAAAAATATTCAATTTTACATTGGACTTGGTACAGAAATTTAA

Upstream 100 bases:

>100_bases
TTTATGAAAAAACCGACAAAATGCACTGAAAATATTGGATCCTAACGAACTTCTCGGTAGACTATAGTGCAATTTACTTA
GAAAATTTTAACCCCTTAAA

Downstream 100 bases:

>100_bases
GGTGAATTTATGACAAAACAACTACAACCATCAGATACTTCACCAAAAGCACCAAAACAAGCAAATAAAAAACACTGGGT
ACGCAAAGTTATTTGTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 578

Protein sequence:

>578_residues
MKKKSLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLINKEEMDGSERYQHLVTKAVDRGLRVFGYYES
SVRFERKQRQGKRDLLIAHVTPGEPTKIAGTDVQIEGEAAQDENFNALRKNLPKDGVLVEHQTYDDYKTAISRLALNRGY
FDGNFKISRLEISPETHQAWWRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLTSDFSSSNWFSS
VLVQPNINHKSKTVDIEIILYPRKKNAMELGVGFATDGGVHGQIGWTKPWINSRGHSLRSNLYLSAPKQTLEATYRIPLL
KNPLNYYYDFAVGWEGEKENDTNTRALTLSALRYWNNAHGWQYFGGLRTRYDSFTQADITDKTLLLYPTVGFTRTRLRGG
SFATWGDVQKITFDLSKRIWLSESSFIKVQASSAWIRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFFAGGDRSVRGYG
YKKIAPKNKNGKLVGGSRLLTGSLEYQYQVYPNWWAATFADSGLAANDYTAKELRYGAGVGVRWASPVGAIKFDIATPIR
DKDNSKNIQFYIGLGTEI

Sequences:

>Translated_578_residues
MKKKSLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLINKEEMDGSERYQHLVTKAVDRGLRVFGYYES
SVRFERKQRQGKRDLLIAHVTPGEPTKIAGTDVQIEGEAAQDENFNALRKNLPKDGVLVEHQTYDDYKTAISRLALNRGY
FDGNFKISRLEISPETHQAWWRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLTSDFSSSNWFSS
VLVQPNINHKSKTVDIEIILYPRKKNAMELGVGFATDGGVHGQIGWTKPWINSRGHSLRSNLYLSAPKQTLEATYRIPLL
KNPLNYYYDFAVGWEGEKENDTNTRALTLSALRYWNNAHGWQYFGGLRTRYDSFTQADITDKTLLLYPTVGFTRTRLRGG
SFATWGDVQKITFDLSKRIWLSESSFIKVQASSAWIRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFFAGGDRSVRGYG
YKKIAPKNKNGKLVGGSRLLTGSLEYQYQVYPNWWAATFADSGLAANDYTAKELRYGAGVGVRWASPVGAIKFDIATPIR
DKDNSKNIQFYIGLGTEI
>Mature_578_residues
MKKKSLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLINKEEMDGSERYQHLVTKAVDRGLRVFGYYES
SVRFERKQRQGKRDLLIAHVTPGEPTKIAGTDVQIEGEAAQDENFNALRKNLPKDGVLVEHQTYDDYKTAISRLALNRGY
FDGNFKISRLEISPETHQAWWRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLTSDFSSSNWFSS
VLVQPNINHKSKTVDIEIILYPRKKNAMELGVGFATDGGVHGQIGWTKPWINSRGHSLRSNLYLSAPKQTLEATYRIPLL
KNPLNYYYDFAVGWEGEKENDTNTRALTLSALRYWNNAHGWQYFGGLRTRYDSFTQADITDKTLLLYPTVGFTRTRLRGG
SFATWGDVQKITFDLSKRIWLSESSFIKVQASSAWIRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFFAGGDRSVRGYG
YKKIAPKNKNGKLVGGSRLLTGSLEYQYQVYPNWWAATFADSGLAANDYTAKELRYGAGVGVRWASPVGAIKFDIATPIR
DKDNSKNIQFYIGLGTEI

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=570, Percent_Identity=43.3333333333333, Blast_Score=490, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 65723; Mature: 65723

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKSLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLINKEEMDGSERY
CCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEHHHCCCCEEEEECHHCCCHHHHH
QHLVTKAVDRGLRVFGYYESSVRFERKQRQGKRDLLIAHVTPGEPTKIAGTDVQIEGEAA
HHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCEECCCEEEEECCCC
QDENFNALRKNLPKDGVLVEHQTYDDYKTAISRLALNRGYFDGNFKISRLEISPETHQAW
CCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEECCCEEEEEEEECCCHHHHH
WRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLTSDFSSSNWFSS
HHHHHHCCCEEEECCEEEEHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHCCCCCCEEE
VLVQPNINHKSKTVDIEIILYPRKKNAMELGVGFATDGGVHGQIGWTKPWINSRGHSLRS
EEECCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHC
NLYLSAPKQTLEATYRIPLLKNPLNYYYDFAVGWEGEKENDTNTRALTLSALRYWNNAHG
CEEEECCHHHHHHEEECCEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEHHHHCCCCCC
WQYFGGLRTRYDSFTQADITDKTLLLYPTVGFTRTRLRGGSFATWGDVQKITFDLSKRIW
EEECCCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCEEEEEEHHCEEE
LSESSFIKVQASSAWIRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFFAGGDRSVRGYG
ECCCCEEEEEECCCEEEEHHCCCEEEEEEEECEEECCCHHHCCCCEEEEECCCCCCCCCC
YKKIAPKNKNGKLVGGSRLLTGSLEYQYQVYPNWWAATFADSGLAANDYTAKELRYGAGV
EEECCCCCCCCEEEECCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHCCCC
GVRWASPVGAIKFDIATPIRDKDNSKNIQFYIGLGTEI
CEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MKKKSLKLTALFLALSCFPAFAEQTVDIEVQGIRGFRAVRNTDLNVNLINKEEMDGSERY
CCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEHHHCCCCEEEEECHHCCCHHHHH
QHLVTKAVDRGLRVFGYYESSVRFERKQRQGKRDLLIAHVTPGEPTKIAGTDVQIEGEAA
HHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCCEEEEEECCCCCCEECCCEEEEECCCC
QDENFNALRKNLPKDGVLVEHQTYDDYKTAISRLALNRGYFDGNFKISRLEISPETHQAW
CCCCHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCEECCCEEEEEEEECCCHHHHH
WRMLFDSGVRYHYGNITFSHSQIRDDYLNNILNIKSGDPYLMNNLSDLTSDFSSSNWFSS
HHHHHHCCCEEEECCEEEEHHHHHHHHHHHEEECCCCCCHHHCCHHHHHHHCCCCCCEEE
VLVQPNINHKSKTVDIEIILYPRKKNAMELGVGFATDGGVHGQIGWTKPWINSRGHSLRS
EEECCCCCCCCEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHC
NLYLSAPKQTLEATYRIPLLKNPLNYYYDFAVGWEGEKENDTNTRALTLSALRYWNNAHG
CEEEECCHHHHHHEEECCEEECCCCEEEEEEEECCCCCCCCCCCEEEEEEHHHHCCCCCC
WQYFGGLRTRYDSFTQADITDKTLLLYPTVGFTRTRLRGGSFATWGDVQKITFDLSKRIW
EEECCCHHHHCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCEEEEEEHHCEEE
LSESSFIKVQASSAWIRTYAENHRIVARAEIGYLHTKDIEKIPPTLRFFAGGDRSVRGYG
ECCCCEEEEEECCCEEEEHHCCCEEEEEEEECEEECCCHHHCCCCEEEEECCCCCCCCCC
YKKIAPKNKNGKLVGGSRLLTGSLEYQYQVYPNWWAATFADSGLAANDYTAKELRYGAGV
EEECCCCCCCCEEEECCEEEEEEEEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHCCCC
GVRWASPVGAIKFDIATPIRDKDNSKNIQFYIGLGTEI
CEEECCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]