Click here to switch to the map view.

The map label for this gene is yibQ [C]

Identifier: 148826600

GI number: 148826600

Start: 1633269

End: 1634111

Strand: Direct

Name: yibQ [C]

Synonym: CGSHiEE_08325

Alternate gene names: 148826600

Gene position: 1633269-1634111 (Clockwise)

Preceding gene: 148826598

Following gene: 148826604

Centisome position: 90.08

GC content: 39.38

Gene sequence:

>843_bases
ATGAATATTCTGATAAAAAGTGCGGTAAAAAATTTCATTGTTTTTTCTACCGCACTTTATACCTCTTTTTCTTTTGCTCA
AAGTAAACTTGCTATTGTGATTGATGATGTAGGCTATCATTCCAAAGAAGATGCGGCAATTTTTGCGATGCCGCGTGAAA
TTTCCGTAGCAATTATTCCTGCTGCGCCCTATGCTCGAGCACGTAATCAAGAAGCAAAATCTCAAGGTAGAGATATTTTA
ATCCATATGCCGATGCAACCAGTAAGTGCAGTGAAAATAGAAGACGGTGGGCTGCATTTAGGAATGTCTGCAGCACAAGT
AAATGATCGCGTTAATACGGCTAAAAATATTGTGCGTGATGCCATCGGTATGAACAATCATATGGGGAGTGCAGCTACGG
CAGATCCCCAATTAATGACTTATTTAATGACCGCACTTCAAGAAAAACATTTATTCTTTTTAGATAGTCGAACAATAGGA
AAATCTGTAGCTGGGAAAATAGCAAAAGAACAAGGCGTGCGTTCATTAGATCGCCATATATTTTTAGATGATAGTAACGA
ATTCGCAGACGTTCAACGTCAATTTAAAGCAGCAATTCACTATGCCAGAAAACACGGCTCCGCCATTGCAATAGGTCATC
CTCGTGCAAATACAATAGCGGTGTTACAAGCAGGTCTTAACAATTTACCAGAAGATATCCAACTTGTCGGAATGGGCAAC
TTATGGCGAAATGAAAAAGTTATTCCGCCCAAGCCATTTATTTTATTATTCAGCGAAGTGCCTGCGCCAACTTCTATAGA
ACCTTTTGAGCCTGTAGGAGTATTGCGTGGAATTCCAAAATAA

Upstream 100 bases:

>100_bases
TTGCTCAAGTAGGAAATACAGGGGAAATATCACGTTCTGCGCTTTATTTTGGTATTAGCCGTAAAGGAACGCCAGTAAAT
CCTGCAGGGTGGGTTCGTTG

Downstream 100 bases:

>100_bases
AACAGTTGCTAATATTTAAAAATAAACATTAACAACTGCTTTGTCTACTATATCAATTTATCAATGGAATAAGTTATAAA
TACGTCTTTTAAGATTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MNILIKSAVKNFIVFSTALYTSFSFAQSKLAIVIDDVGYHSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDIL
IHMPMQPVSAVKIEDGGLHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIG
KSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRANTIAVLQAGLNNLPEDIQLVGMGN
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGVLRGIPK

Sequences:

>Translated_280_residues
MNILIKSAVKNFIVFSTALYTSFSFAQSKLAIVIDDVGYHSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDIL
IHMPMQPVSAVKIEDGGLHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIG
KSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRANTIAVLQAGLNNLPEDIQLVGMGN
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGVLRGIPK
>Mature_280_residues
MNILIKSAVKNFIVFSTALYTSFSFAQSKLAIVIDDVGYHSKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDIL
IHMPMQPVSAVKIEDGGLHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIG
KSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRANTIAVLQAGLNNLPEDIQLVGMGN
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGVLRGIPK

Specific function: Unknown

COG id: COG2861

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yibQ [H]

Homologues:

Organism=Escherichia coli, GI87082298, Length=226, Percent_Identity=44.2477876106195, Blast_Score=184, Evalue=8e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006837
- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF04748 Polysacc_deac_2 [H]

EC number: NA

Molecular weight: Translated: 30633; Mature: 30633

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILIKSAVKNFIVFSTALYTSFSFAQSKLAIVIDDVGYHSKEDAAIFAMPREISVAIIP
CCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCEEEEEEEC
AAPYARARNQEAKSQGRDILIHMPMQPVSAVKIEDGGLHLGMSAAQVNDRVNTAKNIVRD
CCCCHHHCCHHHHHCCCEEEEECCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHH
AIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHI
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCEE
FLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRANTIAVLQAGLNNLPEDIQLVGMGN
EECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCC
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGVLRGIPK
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MNILIKSAVKNFIVFSTALYTSFSFAQSKLAIVIDDVGYHSKEDAAIFAMPREISVAIIP
CCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCEEEEECCEEEEEEEC
AAPYARARNQEAKSQGRDILIHMPMQPVSAVKIEDGGLHLGMSAAQVNDRVNTAKNIVRD
CCCCHHHCCHHHHHCCCEEEEECCCCCCEEEEEECCCEEECCHHHHHHHHHHHHHHHHHH
AIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHI
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHCEE
FLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRANTIAVLQAGLNNLPEDIQLVGMGN
EECCCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCC
LWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGVLRGIPK
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]