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The map label for this gene is napF [C]

Identifier: 148826337

GI number: 148826337

Start: 1358879

End: 1359379

Strand: Direct

Name: napF [C]

Synonym: CGSHiEE_06860

Alternate gene names: 148826337

Gene position: 1358879-1359379 (Clockwise)

Preceding gene: 148826336

Following gene: 148826339

Centisome position: 74.95

GC content: 41.52

Gene sequence:

>501_bases
ATGAAAAACGAAGCCTATTATCAGGCTTATTTAAGCCACCATCATATTTCTCGTAGAGGACTATTGCGTCATGTATTTCC
AGCTACAAAATCAACAATAGAAAAAACGCAGTCTCGTCCTCCCTTTTCAGCACGAGAAGATTTATTTTCCGCCGTCTGCA
ATGGTTGTGGGGAATGCGCTTCAGCTTGCCCTAATGGTTTAATTCAACTAAAACAGCAACAAGCCACCCTTGAAATTGAC
TACGCACCTTGTGATTTGTGTGGTAAATGCGCAGAAGTTTGTCCGACAAATGCACTACATCCTAATTTTCCAGCGGATAC
ATTACTTCGTCCACAATTTTCCTCAGCCTGTTTAATCCTACAAAATCAAACCTGTCCAGACTGCCAAACCGCTTGCCCAC
AACAAGCAATCTCCAGCACTTTAGAGATTGATAATGAACGTTGCAATGGGTGCGGAGAATGTAAAATTACCTGTTTTGTC
GCAGCCATTACACTTAAATAA

Upstream 100 bases:

>100_bases
CTGATTTTTATCAAGCTCTTGCATTACTTACCATAAAAACTTTACAACAATGGCAAGTAGATTTACATATTAATGTACCG
ACAGTAAGATTTTATCGATA

Downstream 100 bases:

>100_bases
AAATCTTGAGACTGTACTAAATAACGACTAAAAATCCCATTTAGTATTCAGGCTTCTCAAACGAAATGGCAAGGTTTATA
CCATCGTTGTCCCTAATGCA

Product: ferredoxin

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECASACPNGLIQLKQQQATLEID
YAPCDLCGKCAEVCPTNALHPNFPADTLLRPQFSSACLILQNQTCPDCQTACPQQAISSTLEIDNERCNGCGECKITCFV
AAITLK

Sequences:

>Translated_166_residues
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECASACPNGLIQLKQQQATLEID
YAPCDLCGKCAEVCPTNALHPNFPADTLLRPQFSSACLILQNQTCPDCQTACPQQAISSTLEIDNERCNGCGECKITCFV
AAITLK
>Mature_166_residues
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECASACPNGLIQLKQQQATLEID
YAPCDLCGKCAEVCPTNALHPNFPADTLLRPQFSSACLILQNQTCPDCQTACPQQAISSTLEIDNERCNGCGECKITCFV
AAITLK

Specific function: Involved In Electron Transfer. [C]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788536, Length=157, Percent_Identity=31.8471337579618, Blast_Score=70, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004496 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 18173; Mature: 18173

Theoretical pI: Translated: 6.91; Mature: 6.91

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
9.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SACPNGLIQLKQQQATLEIDYAPCDLCGKCAEVCPTNALHPNFPADTLLRPQFSSACLIL
HHCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEE
QNQTCPDCQTACPQQAISSTLEIDNERCNGCGECKITCFVAAITLK
ECCCCCCHHHCCHHHHHHHHHHCCCHHCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKNEAYYQAYLSHHHISRRGLLRHVFPATKSTIEKTQSRPPFSAREDLFSAVCNGCGECA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SACPNGLIQLKQQQATLEIDYAPCDLCGKCAEVCPTNALHPNFPADTLLRPQFSSACLIL
HHCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEEE
QNQTCPDCQTACPQQAISSTLEIDNERCNGCGECKITCFVAAITLK
ECCCCCCHHHCCHHHHHHHHHHCCCHHCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]