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The map label for this gene is yohK [C]

Identifier: 148825881

GI number: 148825881

Start: 874634

End: 875329

Strand: Direct

Name: yohK [C]

Synonym: CGSHiEE_04230

Alternate gene names: 148825881

Gene position: 874634-875329 (Clockwise)

Preceding gene: 148825880

Following gene: 148825882

Centisome position: 48.24

GC content: 38.36

Gene sequence:

>696_bases
ATGCAGCAGTACATTATTTATCTTTATACATTTTTAACAATTTTTGGGTTTTGGCTCGCACTACAAATTAGCAAACGTTG
GAAGTCAATGATTTTTAATACTTTTGTTTTAACAGTATTAATTTTGGCGGCGATTTTAGTGATAGGCAAGATTCCCTATG
ATGATTATATGGCAGGAAATGCACCTATTAATAATTTACTTGGCTTGAGCATCGTTGCTCTCGCATTGCCTCTTTATGAA
CAACTTCGCCAAATTGCCAAACAATGGAAAATTATTCTTTCAACGGTGGTTATAGCCTCTTTTTTGGCGATGTTAAGTGG
CGGGCTTTTAGCATTTCTTTTAGGCGCAACGCCCGAAATGGTCGCTACGGTTTTACCTAAATCCATCACAATGCCTATTG
CGATGGAAGTTTCCCGTCATTTAGGCGGCATTCCTGCCGTAACTGCAGTTGGTGTTGTGGTTGCAGGTTTGCAAGGATCG
ATATTTGGTTATCTTGTATTAAAAAAATTGGGTGTTAAACATCAAGAAGCTATTGGGCTTTCTGTTGGTTCGGTTTCTCA
CGCACTCGGTACAGTAAGTTGTATGGAAACGAATCCAACAGCGGGAAGTTACAGTTCTATTTCTCTTGTGCTTTGTGGGA
TTATTAGTTCTATTCTCGCGCCATTTGTATTTAAGCTGATTTATTTCTTTGTTTAA

Upstream 100 bases:

>100_bases
TTGTATCAGATGCAATCTTTTACACATAAACGCAAAAAAGTAATAAAACGTAAGAGAAAATCAGGTAAAACAAGCCAATT
AGTATGTTAGGAAAGTTTAT

Downstream 100 bases:

>100_bases
ATATCAATAAAAATTCAACCGCACTTTATTCATTTTAGATTGTGTTTGTTATAGATAAAGTGCGGTTGTTTTTTGCGCTA
AATGATTAGATAATGCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGNAPINNLLGLSIVALALPLYE
QLRQIAKQWKIILSTVVIASFLAMLSGGLLAFLLGATPEMVATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGS
IFGYLVLKKLGVKHQEAIGLSVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV

Sequences:

>Translated_231_residues
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGNAPINNLLGLSIVALALPLYE
QLRQIAKQWKIILSTVVIASFLAMLSGGLLAFLLGATPEMVATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGS
IFGYLVLKKLGVKHQEAIGLSVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV
>Mature_231_residues
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGNAPINNLLGLSIVALALPLYE
QLRQIAKQWKIILSTVVIASFLAMLSGGLLAFLLGATPEMVATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGS
IFGYLVLKKLGVKHQEAIGLSVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=216, Percent_Identity=43.5185185185185, Blast_Score=193, Evalue=8e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24876; Mature: 24876

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC
APINNLLGLSIVALALPLYEQLRQIAKQWKIILSTVVIASFLAMLSGGLLAFLLGATPEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGSIFGYLVLKKLGVKHQEAIGL
HHHHCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
SVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQQYIIYLYTFLTIFGFWLALQISKRWKSMIFNTFVLTVLILAAILVIGKIPYDDYMAGN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC
APINNLLGLSIVALALPLYEQLRQIAKQWKIILSTVVIASFLAMLSGGLLAFLLGATPEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VATVLPKSITMPIAMEVSRHLGGIPAVTAVGVVVAGLQGSIFGYLVLKKLGVKHQEAIGL
HHHHCCHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
SVGSVSHALGTVSCMETNPTAGSYSSISLVLCGIISSILAPFVFKLIYFFV
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]