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The map label for this gene is fdhD [H]

Identifier: 148825714

GI number: 148825714

Start: 662030

End: 662692

Strand: Direct

Name: fdhD [H]

Synonym: CGSHiEE_03295

Alternate gene names: 148825714

Gene position: 662030-662692 (Clockwise)

Preceding gene: 148825708

Following gene: 148825715

Centisome position: 36.52

GC content: 36.5

Gene sequence:

>663_bases
ATGTGTTCCCCAAACAATTTAGAGGATTTTGCTTTAGGCTTTTCTCTAACAGAGGGAATTATCAATAAACCAGAAGATAT
TTATGGTATTGATGTTGTAGAAGTTTGCAATGGTATTGAAGTGCAAATTGAACTTTCCAGCCGTAAATTTATGGCATTAA
AAGAGCATCGTCGTAATCTTACGGGGCGTACTGGTTGTGGTATTTGTGGTACAGAACAATTGAATCAAGTATATAAAACT
TTTCCGAAATTAGACTGTACTTTTCAATTTGATTTAAATTTGCTAGATAGTTGTCTTATTGATCTTCAAAAAAATCAATT
GCTTGGATGTAAAACTGGTGCTACCCATGCTTGTGCATTTTTCGATTTATATGGAAGTATGTTAGCTATTTACGAGGATG
TGGGTCGCCACGTTGCATTAGATAAATTGCTTGGTTGGCACGCAAAATCGGGTAAACCTAGAGGTTTTATTTTAGCCTCC
AGTCGAGCGAGTTATGAAATGGTGCAAAAAACAGTGGCTTGCGGGGTGGAAATGTTAGTCACGATTTCTGCCGCAACGGA
TTTAGCAGTAACAATGGCAGAAAAACATAATTTGACTTTAATTGGTTTTGCTAGGGAAGGAAAAGGAAATATTTATAGCG
GACATCTACGACTTCACAATTAA

Upstream 100 bases:

>100_bases
TACAGAAAAATTGACCGCACTTTTGCAACAAAAAGAGGACATACTGGCTGTTGAGATACCAGTTTCTTTGGTATATAACG
GCATTTCTCACGCAGTTATG

Downstream 100 bases:

>100_bases
CCCCAACCAAGAGCGAGAGATTTGAGGTTTTGTGTTGATTAAGGAAATAGCGTGATTTGTCTCTTTGTATGTTAAAAATA
GAGTAAATTAGCGGTAAACA

Product: formate dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MCSPNNLEDFALGFSLTEGIINKPEDIYGIDVVEVCNGIEVQIELSSRKFMALKEHRRNLTGRTGCGICGTEQLNQVYKT
FPKLDCTFQFDLNLLDSCLIDLQKNQLLGCKTGATHACAFFDLYGSMLAIYEDVGRHVALDKLLGWHAKSGKPRGFILAS
SRASYEMVQKTVACGVEMLVTISAATDLAVTMAEKHNLTLIGFAREGKGNIYSGHLRLHN

Sequences:

>Translated_220_residues
MCSPNNLEDFALGFSLTEGIINKPEDIYGIDVVEVCNGIEVQIELSSRKFMALKEHRRNLTGRTGCGICGTEQLNQVYKT
FPKLDCTFQFDLNLLDSCLIDLQKNQLLGCKTGATHACAFFDLYGSMLAIYEDVGRHVALDKLLGWHAKSGKPRGFILAS
SRASYEMVQKTVACGVEMLVTISAATDLAVTMAEKHNLTLIGFAREGKGNIYSGHLRLHN
>Mature_220_residues
MCSPNNLEDFALGFSLTEGIINKPEDIYGIDVVEVCNGIEVQIELSSRKFMALKEHRRNLTGRTGCGICGTEQLNQVYKT
FPKLDCTFQFDLNLLDSCLIDLQKNQLLGCKTGATHACAFFDLYGSMLAIYEDVGRHVALDKLLGWHAKSGKPRGFILAS
SRASYEMVQKTVACGVEMLVTISAATDLAVTMAEKHNLTLIGFAREGKGNIYSGHLRLHN

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=222, Percent_Identity=57.6576576576577, Blast_Score=250, Evalue=4e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 24241; Mature: 24241

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCSPNNLEDFALGFSLTEGIINKPEDIYGIDVVEVCNGIEVQIELSSRKFMALKEHRRNL
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHCC
TGRTGCGICGTEQLNQVYKTFPKLDCTFQFDLNLLDSCLIDLQKNQLLGCKTGATHACAF
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCEEECCCCCCHHHHH
FDLYGSMLAIYEDVGRHVALDKLLGWHAKSGKPRGFILASSRASYEMVQKTVACGVEMLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEE
TISAATDLAVTMAEKHNLTLIGFAREGKGNIYSGHLRLHN
EEECHHCEEEEEECCCCEEEEEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MCSPNNLEDFALGFSLTEGIINKPEDIYGIDVVEVCNGIEVQIELSSRKFMALKEHRRNL
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHHHHCC
TGRTGCGICGTEQLNQVYKTFPKLDCTFQFDLNLLDSCLIDLQKNQLLGCKTGATHACAF
CCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHCCCCEEECCCCCCHHHHH
FDLYGSMLAIYEDVGRHVALDKLLGWHAKSGKPRGFILASSRASYEMVQKTVACGVEMLV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEE
TISAATDLAVTMAEKHNLTLIGFAREGKGNIYSGHLRLHN
EEECHHCEEEEEECCCCEEEEEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA