| Definition | Haemophilus influenzae PittEE chromosome, complete genome. |
|---|---|
| Accession | NC_009566 |
| Length | 1,813,033 |
Click here to switch to the map view.
The map label for this gene is yhjE [C]
Identifier: 148825440
GI number: 148825440
Start: 308485
End: 309801
Strand: Direct
Name: yhjE [C]
Synonym: CGSHiEE_01650
Alternate gene names: 148825440
Gene position: 308485-309801 (Clockwise)
Preceding gene: 148825439
Following gene: 148825442
Centisome position: 17.01
GC content: 39.48
Gene sequence:
>1317_bases ATGTCTACACAACTTCGTAATAATCCGATGAAAGTGGCGTTAGCCTCGATGGTCGGTACAGCAATCGAATTTTTTGATTA TTATATCTATGCGGCTGCCGCTGTATTAGTTTTCAATACGCAATTCTTTCATAGCGATGATCCGCTTTCTAATGATTTAC TTTCTCTTTCTACGCTTGCTTTAGCATTTTTTGCACGTCCTATTGGTTCGGCATTATTCGGACACTTTGGCGATAAAATT GGTCGTAAAAAAACCTTGGTTGCCTCTCTTGTTTTAATGGGTGGTTCAACGGTAGTAATTGGTTTACTTCCTAATTATGC TCAAATCGGTATCTGGGCGCCGATTTTGCTTTGCGTATGCCGTGTTGGTCAAGGAATTGGACTCGGCGGCGAATGGGGCG GTGCAGCGTTAGTCGCAACAGAAAATGCACCAGAAGGAAAACGAGCTTGGTACGGTACTTTTCCTCAATTAGGCGCACCA ATTGGTTTATTTGTCGCTAATGGAACGTTCTTCTTAGTTAGCTATTTGCTTGGTCATAATGCACTTGTTGAATGGGCGTG GCGTATTCCATTTGTATCTTCCATTTTATTAGTTGCAGTTGGTTTATATGTTCGCTTAACTTTGCACGAAAGCCACGTAT TTGTGGAAGCAGAGCAAAAAGGCAAAAAATTGAATGCACCAGTGAGAGTTGTGTTTACCAAACACTTAAAACCAATGATC ATTGGTACATTTATTATGGTGGCAACTTATTCTTTGTTTTACATTATGACGGCTTTTGCACAGGCATATTCTCGAACCGC GCCAAAGCTTTCTGAAGCAGGTTATGCGCTTGGCTTAGGTATCCCAGCAAATACATTTACTGGCTTTTTATTAATTAGTG CCATTGTATTTGGTATTTTTATCAGTATTTCCGGTTTTTATGCCGATAAAATTGGTCGTCGTAAATGGTTGATTTGGGTG ACTATTGCTATCGGCGTGCTTGGTTTAGCAATGCCGTTATTCTTAGAAAATGGCACTCCAGTTAGCGTATTTGCATTTTT AGTGATTGGTATGGCGATTATGGGAATGACATTTGGTCCAATGGCTGCGCTATTACCAGAATTATTCCCAACAGAAGTCC GTTATTCAGGTGCCTCTCTTGCGTATAATTTAGCATCAATTATTGGTGCAACAATTGCAGCAATGATTTCTTTAAAAATT AACGCGTCATTCGGTGTAATGGGCGTAGGAATTTATTTAGCAATCAATGCATTAATGACTTTCTTGGCATTATTAGCCTC AAAAGAGACTAAAAATGTAGATTTAACAGAAATCTAA
Upstream 100 bases:
>100_bases TCTAAAAAAATAGAAAATTGCATATTAAAAATTGTTAGACCTTAGTTAAAATGCTAGGATTCAATCCTTTCTCTTTATAA TAAACTTCTAAGGAAACACA
Downstream 100 bases:
>100_bases TTTTAGTCGTAAATATTTTAGGTTATTTAGCCTTTAGAAGTAGTTTATTTAGAACTTATATCAAGTTTAGGTTTCAATGC CAACAAGTAAATAGACTACT
Product: acyl-CoA thioester hydrolase YfbB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MSTQLRNNPMKVALASMVGTAIEFFDYYIYAAAAVLVFNTQFFHSDDPLSNDLLSLSTLALAFFARPIGSALFGHFGDKI GRKKTLVASLVLMGGSTVVIGLLPNYAQIGIWAPILLCVCRVGQGIGLGGEWGGAALVATENAPEGKRAWYGTFPQLGAP IGLFVANGTFFLVSYLLGHNALVEWAWRIPFVSSILLVAVGLYVRLTLHESHVFVEAEQKGKKLNAPVRVVFTKHLKPMI IGTFIMVATYSLFYIMTAFAQAYSRTAPKLSEAGYALGLGIPANTFTGFLLISAIVFGIFISISGFYADKIGRRKWLIWV TIAIGVLGLAMPLFLENGTPVSVFAFLVIGMAIMGMTFGPMAALLPELFPTEVRYSGASLAYNLASIIGATIAAMISLKI NASFGVMGVGIYLAINALMTFLALLASKETKNVDLTEI
Sequences:
>Translated_438_residues MSTQLRNNPMKVALASMVGTAIEFFDYYIYAAAAVLVFNTQFFHSDDPLSNDLLSLSTLALAFFARPIGSALFGHFGDKI GRKKTLVASLVLMGGSTVVIGLLPNYAQIGIWAPILLCVCRVGQGIGLGGEWGGAALVATENAPEGKRAWYGTFPQLGAP IGLFVANGTFFLVSYLLGHNALVEWAWRIPFVSSILLVAVGLYVRLTLHESHVFVEAEQKGKKLNAPVRVVFTKHLKPMI IGTFIMVATYSLFYIMTAFAQAYSRTAPKLSEAGYALGLGIPANTFTGFLLISAIVFGIFISISGFYADKIGRRKWLIWV TIAIGVLGLAMPLFLENGTPVSVFAFLVIGMAIMGMTFGPMAALLPELFPTEVRYSGASLAYNLASIIGATIAAMISLKI NASFGVMGVGIYLAINALMTFLALLASKETKNVDLTEI >Mature_437_residues STQLRNNPMKVALASMVGTAIEFFDYYIYAAAAVLVFNTQFFHSDDPLSNDLLSLSTLALAFFARPIGSALFGHFGDKIG RKKTLVASLVLMGGSTVVIGLLPNYAQIGIWAPILLCVCRVGQGIGLGGEWGGAALVATENAPEGKRAWYGTFPQLGAPI GLFVANGTFFLVSYLLGHNALVEWAWRIPFVSSILLVAVGLYVRLTLHESHVFVEAEQKGKKLNAPVRVVFTKHLKPMII GTFIMVATYSLFYIMTAFAQAYSRTAPKLSEAGYALGLGIPANTFTGFLLISAIVFGIFISISGFYADKIGRRKWLIWVT IAIGVLGLAMPLFLENGTPVSVFAFLVIGMAIMGMTFGPMAALLPELFPTEVRYSGASLAYNLASIIGATIAAMISLKIN ASFGVMGVGIYLAINALMTFLALLASKETKNVDLTEI
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1789941, Length=430, Percent_Identity=54.6511627906977, Blast_Score=407, Evalue=1e-115, Organism=Escherichia coli, GI1788292, Length=433, Percent_Identity=32.5635103926097, Blast_Score=218, Evalue=5e-58, Organism=Escherichia coli, GI1790550, Length=433, Percent_Identity=30.4849884526559, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI1788942, Length=424, Percent_Identity=28.5377358490566, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI87082404, Length=427, Percent_Identity=25.5269320843091, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI87082231, Length=398, Percent_Identity=25.3768844221106, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47017; Mature: 46886
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTQLRNNPMKVALASMVGTAIEFFDYYIYAAAAVLVFNTQFFHSDDPLSNDLLSLSTLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAFFARPIGSALFGHFGDKIGRKKTLVASLVLMGGSTVVIGLLPNYAQIGIWAPILLCVC HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH RVGQGIGLGGEWGGAALVATENAPEGKRAWYGTFPQLGAPIGLFVANGTFFLVSYLLGHN HCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCEEEEEECCHHHHHHHHHCCH ALVEWAWRIPFVSSILLVAVGLYVRLTLHESHVFVEAEQKGKKLNAPVRVVFTKHLKPMI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEHHCCCCCCCCEEEEEHHHCHHHH IGTFIMVATYSLFYIMTAFAQAYSRTAPKLSEAGYALGLGIPANTFTGFLLISAIVFGIF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH ISISGFYADKIGRRKWLIWVTIAIGVLGLAMPLFLENGTPVSVFAFLVIGMAIMGMTFGP HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCH MAALLPELFPTEVRYSGASLAYNLASIIGATIAAMISLKINASFGVMGVGIYLAINALMT HHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH FLALLASKETKNVDLTEI HHHHHHCCCCCCCCCCCC >Mature Secondary Structure STQLRNNPMKVALASMVGTAIEFFDYYIYAAAAVLVFNTQFFHSDDPLSNDLLSLSTLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH LAFFARPIGSALFGHFGDKIGRKKTLVASLVLMGGSTVVIGLLPNYAQIGIWAPILLCVC HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHH RVGQGIGLGGEWGGAALVATENAPEGKRAWYGTFPQLGAPIGLFVANGTFFLVSYLLGHN HCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCEEEEEECCHHHHHHHHHCCH ALVEWAWRIPFVSSILLVAVGLYVRLTLHESHVFVEAEQKGKKLNAPVRVVFTKHLKPMI HHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEHHCCCCCCCCEEEEEHHHCHHHH IGTFIMVATYSLFYIMTAFAQAYSRTAPKLSEAGYALGLGIPANTFTGFLLISAIVFGIF HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCEEEECCCCHHHHHHHHHHHHHHHHHH ISISGFYADKIGRRKWLIWVTIAIGVLGLAMPLFLENGTPVSVFAFLVIGMAIMGMTFGP HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCH MAALLPELFPTEVRYSGASLAYNLASIIGATIAAMISLKINASFGVMGVGIYLAINALMT HHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHH FLALLASKETKNVDLTEI HHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]