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The map label for this gene is hofD [H]

Identifier: 148825425

GI number: 148825425

Start: 292915

End: 293523

Strand: Direct

Name: hofD [H]

Synonym: CGSHiEE_01575

Alternate gene names: 148825425

Gene position: 292915-293523 (Clockwise)

Preceding gene: 148825424

Following gene: 148825427

Centisome position: 16.16

GC content: 34.65

Gene sequence:

>609_bases
ATGATTTACTTCACAATGTTTTTATTAGGCGGCATCTTCGGGATCGCATTGTGGTTCTACCTATCTGGTTTTATTACCCG
TTTACAGCAAGAGATTTATGCGACTTATATTGAATTATTCCCACAAAACTTTCTGCCATTTCAGCCTAGCGTTTCCTCTA
TTCAACAAAAAAAGTGCGGTCATATTTTGAGGTATTTTTTAAATGTTGGGGTAGGATTTATATTTTTACAAATTGCTTTC
AAGGACTCTATTTTCGCTATATGGCTAGGGCTCACACTTCTTATCCTTTGGGCAATTAGTTATCTTGATTGGTACTATCA
ACTTATTTCTACTACACCCTGTTTATGGCTACTTACAATCGGTTTATTTGGGGCAGACAATAATTTTTCATTGCTTACGT
TATCTGAAAGTATAAAAAGTGCGGCAAGTTTTTTTATTGTTTTCTACGCAATCTATTGGATTGCAAAATTCTATTACGGA
AAAGAAGCCTTTGGACGGGGAGATTATTGGCTAGCAATGGCATTAGGAAGTTTTATTCATTTAGAAACTTTGCCGCACTT
TTTTATTATTAGCCTCAGTTCTTGGAATATGTTTTTCGCTTATTCATAA

Upstream 100 bases:

>100_bases
AAATGCTAGAACCATTAATGATGGTAATTATCGGCAGTCTGATTGGAATTATTATGATGGGAATGTATTTACCTATCTTT
AATATGGGCTCTGTTATTCA

Downstream 100 bases:

>100_bases
AAAGAAAAAAGAATTTATACCTTTTGCCCCTTTTATGAACTTATCAGCTGTCATCATTTATTTCGTCAAATATTACGGAT
ATTAAAAAGGGGAAAACATA

Product: N-acetyl-anhydromuranmyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MIYFTMFLLGGIFGIALWFYLSGFITRLQQEIYATYIELFPQNFLPFQPSVSSIQQKKCGHILRYFLNVGVGFIFLQIAF
KDSIFAIWLGLTLLILWAISYLDWYYQLISTTPCLWLLTIGLFGADNNFSLLTLSESIKSAASFFIVFYAIYWIAKFYYG
KEAFGRGDYWLAMALGSFIHLETLPHFFIISLSSWNMFFAYS

Sequences:

>Translated_202_residues
MIYFTMFLLGGIFGIALWFYLSGFITRLQQEIYATYIELFPQNFLPFQPSVSSIQQKKCGHILRYFLNVGVGFIFLQIAF
KDSIFAIWLGLTLLILWAISYLDWYYQLISTTPCLWLLTIGLFGADNNFSLLTLSESIKSAASFFIVFYAIYWIAKFYYG
KEAFGRGDYWLAMALGSFIHLETLPHFFIISLSSWNMFFAYS
>Mature_202_residues
MIYFTMFLLGGIFGIALWFYLSGFITRLQQEIYATYIELFPQNFLPFQPSVSSIQQKKCGHILRYFLNVGVGFIFLQIAF
KDSIFAIWLGLTLLILWAISYLDWYYQLISTTPCLWLLTIGLFGADNNFSLLTLSESIKSAASFFIVFYAIYWIAKFYYG
KEAFGRGDYWLAMALGSFIHLETLPHFFIISLSSWNMFFAYS

Specific function: Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue [H]

COG id: COG1989

COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A24 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000045 [H]

Pfam domain/function: PF01478 Peptidase_A24 [H]

EC number: =3.4.23.43 [H]

Molecular weight: Translated: 23504; Mature: 23504

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYFTMFLLGGIFGIALWFYLSGFITRLQQEIYATYIELFPQNFLPFQPSVSSIQQKKCG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
HILRYFLNVGVGFIFLQIAFKDSIFAIWLGLTLLILWAISYLDWYYQLISTTPCLWLLTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLFGADNNFSLLTLSESIKSAASFFIVFYAIYWIAKFYYGKEAFGRGDYWLAMALGSFIH
HHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHH
LETLPHFFIISLSSWNMFFAYS
HHHCCCEEEEEECCCCEEEEEC
>Mature Secondary Structure
MIYFTMFLLGGIFGIALWFYLSGFITRLQQEIYATYIELFPQNFLPFQPSVSSIQQKKCG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
HILRYFLNVGVGFIFLQIAFKDSIFAIWLGLTLLILWAISYLDWYYQLISTTPCLWLLTI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GLFGADNNFSLLTLSESIKSAASFFIVFYAIYWIAKFYYGKEAFGRGDYWLAMALGSFIH
HHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHH
LETLPHFFIISLSSWNMFFAYS
HHHCCCEEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]