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The map label for this gene is rdgC [H]

Identifier: 148825414

GI number: 148825414

Start: 283391

End: 284299

Strand: Direct

Name: rdgC [H]

Synonym: CGSHiEE_01520

Alternate gene names: 148825414

Gene position: 283391-284299 (Clockwise)

Preceding gene: 148825409

Following gene: 148825421

Centisome position: 15.63

GC content: 37.29

Gene sequence:

>909_bases
ATGTGGTTCAAAAATTTAATGACTTATAGACTGACTAAACCGCTAGATTGGGATCTTGCACAGCTACAAACTCAACTGGA
AGATTGTCAATTTCATCCTTGCGGTGCTCAAGATCAAAGTAAATTTGGTTGGTCTGCGCCATTAAGAGGTTCTGATTTAC
TCTATTTTTCTGTTGGAAAACAAATTCTATTAATCGCCAAAAAAGAAGAAAAAATCTTGCCGGCAAATGTGGTCAAACGT
GAATTAGATGACCGCATTGAAAGCCTCGAACAAAAAGAAAACCGCAAACTTAAAAAGGTAGAAAAACAAACATTAAAAGA
TGATGTTGTTATGAATTTATTGCCTCGTGCGTTTAGTAAAAATCAGCATACGGCGCTATGGATTGATACGGAAAATAATC
TTGTTCATGTTGATGCCGCATCAAGTAAACGCGCGGAAGATGCGCTTGCATTACTGCGGAAATCCTTAGGTTCGCTCCCT
GTCGTGCCTTTAGCCTTTGCTAATGAACCCAGCACGATTTTAACCAATTGGATCCTTCAAGATACTTTACCGCATTGGTT
ACTTGCATTAGAAGAAGCGGAGCTTCGTGGCAGTCAGGAAGACAGCGTTATTCGTTGTAAAAAACAACCTTTAGAAAATG
AAGAAATTCTCGCTCTTCTGCAAGATGGCAAAAAAGTAGTAAGTAAATTAGCCTTAGAATGGGAGGATACCTTAACTTTC
GTTTTTAACGAGGATTGCACAATCAAACGTTTAAAATTTGCAGATAGTATACGTGAAAAAAATGATGATATTCTGAAAGA
AGATTTTACACAGCGTTTCGATGCAGATTTTGTACTGATGACAGGTATTTTAGCCAAACTCACGGAAAATTTATTAGATG
AATTTGGTGGCGAAAAAACGAGATTATAA

Upstream 100 bases:

>100_bases
CCGCCGCCAATAAAGGCAATCAATTTGTGTTGCATCGTTTTTCCTACTTTTATGGGCTATAATGCTGCATATTCTACCCT
ATATTGAAGGAAGTGTTACG

Downstream 100 bases:

>100_bases
AATCGCACTTTAATCATTCTAAAATTAGGTTTATTTTGGCAATGTAAATTTAATATTCAGTGCATTCAAACCAGCTCTCT
AAAATTAAACAGGCTGAAAT

Product: recombination associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MWFKNLMTYRLTKPLDWDLAQLQTQLEDCQFHPCGAQDQSKFGWSAPLRGSDLLYFSVGKQILLIAKKEEKILPANVVKR
ELDDRIESLEQKENRKLKKVEKQTLKDDVVMNLLPRAFSKNQHTALWIDTENNLVHVDAASSKRAEDALALLRKSLGSLP
VVPLAFANEPSTILTNWILQDTLPHWLLALEEAELRGSQEDSVIRCKKQPLENEEILALLQDGKKVVSKLALEWEDTLTF
VFNEDCTIKRLKFADSIREKNDDILKEDFTQRFDADFVLMTGILAKLTENLLDEFGGEKTRL

Sequences:

>Translated_302_residues
MWFKNLMTYRLTKPLDWDLAQLQTQLEDCQFHPCGAQDQSKFGWSAPLRGSDLLYFSVGKQILLIAKKEEKILPANVVKR
ELDDRIESLEQKENRKLKKVEKQTLKDDVVMNLLPRAFSKNQHTALWIDTENNLVHVDAASSKRAEDALALLRKSLGSLP
VVPLAFANEPSTILTNWILQDTLPHWLLALEEAELRGSQEDSVIRCKKQPLENEEILALLQDGKKVVSKLALEWEDTLTF
VFNEDCTIKRLKFADSIREKNDDILKEDFTQRFDADFVLMTGILAKLTENLLDEFGGEKTRL
>Mature_302_residues
MWFKNLMTYRLTKPLDWDLAQLQTQLEDCQFHPCGAQDQSKFGWSAPLRGSDLLYFSVGKQILLIAKKEEKILPANVVKR
ELDDRIESLEQKENRKLKKVEKQTLKDDVVMNLLPRAFSKNQHTALWIDTENNLVHVDAASSKRAEDALALLRKSLGSLP
VVPLAFANEPSTILTNWILQDTLPHWLLALEEAELRGSQEDSVIRCKKQPLENEEILALLQDGKKVVSKLALEWEDTLTF
VFNEDCTIKRLKFADSIREKNDDILKEDFTQRFDADFVLMTGILAKLTENLLDEFGGEKTRL

Specific function: May be involved in recombination [H]

COG id: COG2974

COG function: function code L; DNA recombination-dependent growth factor C

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdgC family [H]

Homologues:

Organism=Escherichia coli, GI1786592, Length=303, Percent_Identity=51.1551155115512, Blast_Score=300, Evalue=1e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007476 [H]

Pfam domain/function: PF04381 RdgC [H]

EC number: NA

Molecular weight: Translated: 34695; Mature: 34695

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWFKNLMTYRLTKPLDWDLAQLQTQLEDCQFHPCGAQDQSKFGWSAPLRGSDLLYFSVGK
CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
QILLIAKKEEKILPANVVKRELDDRIESLEQKENRKLKKVEKQTLKDDVVMNLLPRAFSK
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQHTALWIDTENNLVHVDAASSKRAEDALALLRKSLGSLPVVPLAFANEPSTILTNWILQ
CCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
DTLPHWLLALEEAELRGSQEDSVIRCKKQPLENEEILALLQDGKKVVSKLALEWEDTLTF
HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
VFNEDCTIKRLKFADSIREKNDDILKEDFTQRFDADFVLMTGILAKLTENLLDEFGGEKT
EECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
RL
CC
>Mature Secondary Structure
MWFKNLMTYRLTKPLDWDLAQLQTQLEDCQFHPCGAQDQSKFGWSAPLRGSDLLYFSVGK
CCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
QILLIAKKEEKILPANVVKRELDDRIESLEQKENRKLKKVEKQTLKDDVVMNLLPRAFSK
EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NQHTALWIDTENNLVHVDAASSKRAEDALALLRKSLGSLPVVPLAFANEPSTILTNWILQ
CCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
DTLPHWLLALEEAELRGSQEDSVIRCKKQPLENEEILALLQDGKKVVSKLALEWEDTLTF
HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEE
VFNEDCTIKRLKFADSIREKNDDILKEDFTQRFDADFVLMTGILAKLTENLLDEFGGEKT
EECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
RL
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA