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The map label for this gene is 148825401

Identifier: 148825401

GI number: 148825401

Start: 272906

End: 273289

Strand: Direct

Name: 148825401

Synonym: CGSHiEE_01455

Alternate gene names: NA

Gene position: 272906-273289 (Clockwise)

Preceding gene: 148825399

Following gene: 148825404

Centisome position: 15.05

GC content: 44.79

Gene sequence:

>384_bases
ATGGTGGACTGTTATAGCTCTATCAACGTTTCAGCAGGCTTTGGCAGCTTTAACGAAGGGGCAACAGAAGCCGACGGGCA
AGAGCCTTATTCAGATAGCCTATTATGCAGTTTAGGCGTAAAAGCGGAAAAATGTGCCGTATTTTGGGCAAACGGCAATT
CTATGCTACCCACCATCAACGATGGAGACCAAATGTTGGTAGATTTAAGCCGCAAAGAAATTCAAGGCGACCGCATTTAC
CTTGTTCAAAACGGCGAAAGCATGTGGGTAAAACGTGTGAAAATGGAATGGGACGGCATTTCGCTTATCAGCGATAACAA
AGAAAAGTACCCGCCAATTAGCATTACAGGCAAAGATGCCCAGCATTTACAGATTATCGGGTAA

Upstream 100 bases:

>100_bases
AGGCGGGTCAAGCAATAAAACAACGACAGAAAAACCGACAGGAAGCCTTGTTAGCCGTGCGTTTGAGAGAATGTAAGAGT
TACTAGATGAGGGCGTGAGT

Downstream 100 bases:

>100_bases
GTGGTGCATATTGGGCATAGCCTGATTTAAAATTTTAAAATCCTTTTAAAAACTATTTAAAACCTTCTCAAACCTATGCA
AAAAATAGTGCAAAATTAGA

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MVDCYSSINVSAGFGSFNEGATEADGQEPYSDSLLCSLGVKAEKCAVFWANGNSMLPTINDGDQMLVDLSRKEIQGDRIY
LVQNGESMWVKRVKMEWDGISLISDNKEKYPPISITGKDAQHLQIIG

Sequences:

>Translated_127_residues
MVDCYSSINVSAGFGSFNEGATEADGQEPYSDSLLCSLGVKAEKCAVFWANGNSMLPTINDGDQMLVDLSRKEIQGDRIY
LVQNGESMWVKRVKMEWDGISLISDNKEKYPPISITGKDAQHLQIIG
>Mature_127_residues
MVDCYSSINVSAGFGSFNEGATEADGQEPYSDSLLCSLGVKAEKCAVFWANGNSMLPTINDGDQMLVDLSRKEIQGDRIY
LVQNGESMWVKRVKMEWDGISLISDNKEKYPPISITGKDAQHLQIIG

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 13968; Mature: 13968

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDCYSSINVSAGFGSFNEGATEADGQEPYSDSLLCSLGVKAEKCAVFWANGNSMLPTIN
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCEECCEEC
DGDQMLVDLSRKEIQGDRIYLVQNGESMWVKRVKMEWDGISLISDNKEKYPPISITGKDA
CCCEEEEECCCHHCCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCCCEEEECCCC
QHLQIIG
CEEEEEC
>Mature Secondary Structure
MVDCYSSINVSAGFGSFNEGATEADGQEPYSDSLLCSLGVKAEKCAVFWANGNSMLPTIN
CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCEECCEEC
DGDQMLVDLSRKEIQGDRIYLVQNGESMWVKRVKMEWDGISLISDNKEKYPPISITGKDA
CCCEEEEECCCHHCCCCEEEEEECCCCEEEEEEEECCCCEEEEECCCCCCCCEEEECCCC
QHLQIIG
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]