| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is ppe63 [H]
Identifier: 148825029
GI number: 148825029
Start: 4299722
End: 4300936
Strand: Direct
Name: ppe63 [H]
Synonym: TBFG_13856
Alternate gene names: 148825029
Gene position: 4299722-4300936 (Clockwise)
Preceding gene: 148825028
Following gene: 148825033
Centisome position: 97.18
GC content: 61.89
Gene sequence:
>1215_bases ATGAAATGTCCAGGCGTCTCCGACTGCGTTGCGACCGTAAGGCACGATAACGTGTTTGCTATTGCTGCTGGTTTGCGTTG GTCGGCCGCTGTACCGCCGCTACACAAAGGGGACGCTGTGACCAAACTGCTCGTCGGGGCCATCGCGGGCGGAATGCTAG CTTGCGCAGCTATATTGGGCGACGGAATCGCTTCGGCCGATACTGCGTTGATAGTACCCGGTACCGCACCGTCCCCGTAC GGGCCACTCAGGTCGCTCTATCATTTCAATCCCGCGATGCAGCCTCAGATCGGCGCGAATTACTACAACCCCACCGCTAC CCGCCACGTCGTTTCATATCCAGGCAGCTTTTGGCCTGTCACAGGCTTGAATTCGCCCACCGTCGGCAGTTCTGTCAGTG CCGGGACGAACAATCTCGATGCGGCGATCCGCAGCACTGACGGACCAATCTTCGTGGCCGGGTTATCACAGGGCACGCTC GTGCTTGACCGCGAGCAGGCACGGTTAGCGAATGACCCGACGGCTCCTCCCCCTGGGCAACTCACATTCATCAAGGCCGG CGACCCTAACAATCTTCTTTGGCGGGCGTTTAGGCCGGGAACCCACGTGCCGATCATCGACTACACCGTTCCGGCCCCAG CGGAAAGCCAGTACGACACAATCAATATCGTGGGCCAGTACGACATTTTTTCTGACCCGCCTAATCGTCCGGGCAACCTA CTCGCTGACCTCAATGCGATTGCCGCGGGCGGATACTACGGCCACAGCGCCACCGCATTCTCGGACCCAGCTCGCGTTGC GCCTAGGGACATTACGACGACAACGAACAGTTTGGGTGCGACGACCACGACCTACTTCATCCGGACCGATCAGCTACCTC TGGTGCGGGCGCTGGTGGACATGGCGGGCCTGCCCCCGCAGGCGGCGGGAACAGTTGATGCCGCACTGCGGCCCATAATT GACAGGGCTTATCAGCCCGGACCAGCACCCGCTGTGAACCCGCGTGATTTGGTCCAGGGCATCCGCGGTATCCCCGCCAT CGCCCCTGCCATCGCCATCCCTATCGGCAGCACCACCGGGGCCAGTGCCGCCACCAGCACCGCTGCCGCCACGGCAGCAG CAACAAATGCGCTCCGCGGGGCCAACGTGGGCCCGGGCGCCAACAAGGCGTTGTCGATGGTCCGGGGTTTGCTACCCAAA GGGAAGAAGCACTAG
Upstream 100 bases:
>100_bases GACGCCGCGTTGCTGGTGGCCGCCGGAGGTTGCCTGATGCTCACGCTAGGCCTGAGCAACCTGTAGGCGGCGGCGGGCTT GCCTAACGCAGAGCTCTCAC
Downstream 100 bases:
>100_bases CCATAAAGTCCACGACCTACGGTGGCGTTTCGCAGTTGGGGGTGTAAAGGGGGTTGAGGTCTTCGACGATGGCGGTTGCT GCTGGCCCACCAATCCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPY GPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTL VLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPII DRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPK GKKH
Sequences:
>Translated_404_residues MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPY GPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTL VLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPII DRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPK GKKH >Mature_404_residues MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILGDGIASADTALIVPGTAPSPY GPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPVTGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTL VLDREQARLANDPTAPPPGQLTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVDMAGLPPQAAGTVDAALRPII DRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTGASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPK GKKH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mycobacterial PPE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013228 - InterPro: IPR000030 [H]
Pfam domain/function: PF08237 PE-PPE; PF00823 PPE [H]
EC number: NA
Molecular weight: Translated: 41408; Mature: 41408
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG CCCCCHHHHHHHHHCCCEEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV CCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEE TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ CCCCCCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCEEEEECHHHHHCCCCCCCCCCC LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL EEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCH LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHH MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHCEEEEECCCCCC ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKCPGVSDCVATVRHDNVFAIAAGLRWSAAVPPLHKGDAVTKLLVGAIAGGMLACAAILG CCCCCHHHHHHHHHCCCEEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH DGIASADTALIVPGTAPSPYGPLRSLYHFNPAMQPQIGANYYNPTATRHVVSYPGSFWPV CCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEE TGLNSPTVGSSVSAGTNNLDAAIRSTDGPIFVAGLSQGTLVLDREQARLANDPTAPPPGQ CCCCCCCCCCCCCCCCCCHHHHEECCCCCEEEEECCCCEEEEECHHHHHCCCCCCCCCCC LTFIKAGDPNNLLWRAFRPGTHVPIIDYTVPAPAESQYDTINIVGQYDIFSDPPNRPGNL EEEEECCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEEEEEECCCCCCCCCCCH LADLNAIAAGGYYGHSATAFSDPARVAPRDITTTTNSLGATTTTYFIRTDQLPLVRALVD HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHH MAGLPPQAAGTVDAALRPIIDRAYQPGPAPAVNPRDLVQGIRGIPAIAPAIAIPIGSTTG HCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHCEEEEECCCCCC ASAATSTAAATAAATNALRGANVGPGANKALSMVRGLLPKGKKH CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]