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The map label for this gene is ykoG [H]

Identifier: 148824970

GI number: 148824970

Start: 4224081

End: 4224941

Strand: Reverse

Name: ykoG [H]

Synonym: TBFG_13797

Alternate gene names: 148824970

Gene position: 4224941-4224081 (Counterclockwise)

Preceding gene: 148824972

Following gene: 148824969

Centisome position: 95.49

GC content: 63.07

Gene sequence:

>861_bases
GTGGGGTACCGCCCGGATCCGGCCCGCTGGCAGGCTCCGAACGTGCCCCAAATCGGGTTTCATAGCGCGCACATAGGATC
CGCATGGCGTCTGCTCAGCCGTGTGCGGATACTTGACGCTGTGACGCAGCACCGCATCTCGGTTGAGCGTGTCGTAATGC
GGCGCGCCGATGGCCAACCGGTCACTGTGCTGGTGGTCGACGACGAACCCGTTCTGGCCGAGATGGTGTCCATGGCATTG
CGGTATGAAGGTTGGAACATCACCACCGCCGGTGACGGATCGTCGGCGATTGCGGCGGCCCGCCGCCAGCGGCCCGATGT
GGTTGTGCTCGACGTGATGTTGCCTGACATGAGCGGTCTTGACGTGCTGCACAAGTTGCGCAGCGAGAATCCAGGCCTGC
CGGTTCTACTGCTGACGGCCAAGGACGCGGTGGAAGATCGTATAGCTGGGTTGACCGCGGGGGGCGACGACTACGTCACC
AAGCCGTTTAGCATCGAGGAGGTCGTGCTTCGGCTGCGGGCGTTACTGCGTCGCACGGGGGTGACGACAGTCGACAGCGG
TGCCCAGCTAGTGGTCGGAGACTTGGTGCTGGACGAAGACAGCCACGAGGTGATGCGCGCCGGCGAACCGGTGTCGTTGA
CGTCCACCGAGTTCGAGCTGCTGCGGTTCATGATGCACAACTCCAAGCGGGTGCTGAGCAAAGCCCAGATTCTGGACCGC
GTCTGGAGTTACGACTTCGGCGGCCGGTCCAATATCGTGGAGCTGTACATCTCGTACCTGCGCAAAAAGATCGACAACGG
TCGCGAACCCATGATTCACACGCTGCGCGGCGCCGGCTATGTGCTCAAGCCGGCCCGCTAG

Upstream 100 bases:

>100_bases
GCGTTGGTCCGGGACGCTGCCTCAAGCGTGGCAGCGGGATTTGCTTCAGCAGCCCGGTCGCCAGCAGCCGCTACTGGTAC
CAACATGCGCGCCGACGTGA

Downstream 100 bases:

>100_bases
CAGTCCGCGAATTTGGTCGCTTCGGCTGCGGCTCCTGGTCGGACAGGTTGTCGTCCTCGCCGTGGTGTGTGTGGGAATCA
CCGCGGCAACCGAAATGGCG

Product: two component transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MGYRPDPARWQAPNVPQIGFHSAHIGSAWRLLSRVRILDAVTQHRISVERVVMRRADGQPVTVLVVDDEPVLAEMVSMAL
RYEGWNITTAGDGSSAIAAARRQRPDVVVLDVMLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVT
KPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVLSKAQILDR
VWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR

Sequences:

>Translated_286_residues
MGYRPDPARWQAPNVPQIGFHSAHIGSAWRLLSRVRILDAVTQHRISVERVVMRRADGQPVTVLVVDDEPVLAEMVSMAL
RYEGWNITTAGDGSSAIAAARRQRPDVVVLDVMLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVT
KPFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVLSKAQILDR
VWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR
>Mature_285_residues
GYRPDPARWQAPNVPQIGFHSAHIGSAWRLLSRVRILDAVTQHRISVERVVMRRADGQPVTVLVVDDEPVLAEMVSMALR
YEGWNITTAGDGSSAIAAARRQRPDVVVLDVMLPDMSGLDVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTK
PFSIEEVVLRLRALLRRTGVTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVLSKAQILDRV
WSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR

Specific function: Probable member of the two-component regulatory system ykoH/ykoG [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=222, Percent_Identity=39.6396396396396, Blast_Score=167, Evalue=6e-43,
Organism=Escherichia coli, GI1786599, Length=221, Percent_Identity=38.9140271493213, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI1790860, Length=224, Percent_Identity=37.9464285714286, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=35.4545454545455, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=35.5555555555556, Blast_Score=131, Evalue=6e-32,
Organism=Escherichia coli, GI87082012, Length=219, Percent_Identity=33.7899543378995, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=33.7837837837838, Blast_Score=125, Evalue=4e-30,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=30.7017543859649, Blast_Score=119, Evalue=2e-28,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=31.390134529148, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI2367329, Length=230, Percent_Identity=33.4782608695652, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1788394, Length=220, Percent_Identity=30.4545454545455, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1787229, Length=234, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=28.695652173913, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=29.9145299145299, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=37.037037037037, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790437, Length=119, Percent_Identity=32.7731092436975, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1790299, Length=107, Percent_Identity=33.6448598130841, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1788521, Length=120, Percent_Identity=35.8333333333333, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1788905, Length=104, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788713, Length=123, Percent_Identity=30.0813008130081, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=111, Percent_Identity=29.7297297297297, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 31772; Mature: 31641

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRPDPARWQAPNVPQIGFHSAHIGSAWRLLSRVRILDAVTQHRISVERVVMRRADGQP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDVMLPDMSGL
EEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCH
DVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRALLRRTG
HHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
VTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVLSKAQILDR
CCEECCCCEEEEEEEEECCCCHHHHHCCCCCEECHHHHHHHHHHHHCHHHHHHHHHHHHH
VWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCCC
>Mature Secondary Structure 
GYRPDPARWQAPNVPQIGFHSAHIGSAWRLLSRVRILDAVTQHRISVERVVMRRADGQP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VTVLVVDDEPVLAEMVSMALRYEGWNITTAGDGSSAIAAARRQRPDVVVLDVMLPDMSGL
EEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCH
DVLHKLRSENPGLPVLLLTAKDAVEDRIAGLTAGGDDYVTKPFSIEEVVLRLRALLRRTG
HHHHHHHCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
VTTVDSGAQLVVGDLVLDEDSHEVMRAGEPVSLTSTEFELLRFMMHNSKRVLSKAQILDR
CCEECCCCEEEEEEEEECCCCHHHHHCCCCCEECHHHHHHHHHHHHCHHHHHHHHHHHHH
VWSYDFGGRSNIVELYISYLRKKIDNGREPMIHTLRGAGYVLKPAR
HHCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]