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The map label for this gene is osmF [H]

Identifier: 148824964

GI number: 148824964

Start: 4217427

End: 4218374

Strand: Reverse

Name: osmF [H]

Synonym: TBFG_13791

Alternate gene names: 148824964

Gene position: 4218374-4217427 (Counterclockwise)

Preceding gene: 148824966

Following gene: 148824963

Centisome position: 95.34

GC content: 62.55

Gene sequence:

>948_bases
ATGAGGATGCTGCGACGCCTACGTCGCGCAACTGTCGCTGCGGCTGTGTGGCTCGCGACGGTGTGCCTGGTTGCGTCCTG
CGCCAATGCTGATCCGCTCGGGTCAGCGACCGGCAGTGTGAAGTCCATCGTCGTCGGGTCCGGTGATTTTCCGGAATCGC
AGGTGATCGCCGAAATCTACGCACAAGTGTTGCAGGCCAACGGTTTCGACGTGGGGCGGCGGTTGGGAATTGGCAGTCGA
GAGACGTATATCCTGGCGCTCAAAGATCATTCCATCGACCTGGTGCCGGAGTATATCGGCAACTTGCTGCTGTACTTTCA
ACCCGACGCCACGGTGACCATGCTCGATGCCGTTGAGTTGGAGCTCTACAAGCGACTTCCCGGCGATCTGTCGATCCTGA
CGCCGTCGCCGGCCTCTGACACTGACACCGTCACCGTCACCGCCGCTACCGCCGCCCGGTGGAACCTGAAAACGATCGCC
GACCTGGCCCCGCATTCCGCGGATGTGAAGTTCGCGGCGCCGTCGGCCTTTCAGACCCGGCCGTCCGGGTTGCCCGGGCT
GCGGCACAAATACTCACTCGACATCGCGCCGGGCAACTTCGTGACCATCAACGACGGCGGCGGTGCGGTGACCGTGCGAG
CACTGGTGGAGGGAACGGCCACAGCCGCCAACCTCTTCAGCACCTCTGCGGCTATCCCGCAAAACCACCTGGTGGTGCTG
GAAGATCCCGAACATAACTTCCTAGCCGGAAACATTGTGCCGCTTGTGAATTCGCGAAAGAAGTCGGATCACCTCAAAGA
TGTGCTGGACGCGGTGTCGGCAAAGCTGACCACTGCCGGCCTGGCCGAGCTCAATGCAGCGGTGTCCGGCAACTCCGGGG
TGGACCCCGACCAGGCCGCGCGGAAATGGGTGCGGGACAACGGTTTCGATCACCCAGTGCGGCAGTAG

Upstream 100 bases:

>100_bases
TCCTATCCCACACAGAATGAAACCAAACCACGCCGGAAAAATCCCAGTACATGCCGAGTTGTGGAAGCACGGCGCCGCCG
CTGACGATAGTGTCAACTGC

Downstream 100 bases:

>100_bases
GCACCACGTTGATCTGCTTTGACGATGTCAGCAAGGTGTACGCACACGGTGCCACCGCCGTAGACCGGCTGACGCTGGAA
GTCCCTAACGGCATGCTGAC

Product: osmoprotectant (glycine betaine/carnitine/choline/L-proline) transport system substrate binding lipoprotein proX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRMLRRLRRATVAAAVWLATVCLVASCANADPLGSATGSVKSIVVGSGDFPESQVIAEIYAQVLQANGFDVGRRLGIGSR
ETYILALKDHSIDLVPEYIGNLLLYFQPDATVTMLDAVELELYKRLPGDLSILTPSPASDTDTVTVTAATAARWNLKTIA
DLAPHSADVKFAAPSAFQTRPSGLPGLRHKYSLDIAPGNFVTINDGGGAVTVRALVEGTATAANLFSTSAAIPQNHLVVL
EDPEHNFLAGNIVPLVNSRKKSDHLKDVLDAVSAKLTTAGLAELNAAVSGNSGVDPDQAARKWVRDNGFDHPVRQ

Sequences:

>Translated_315_residues
MRMLRRLRRATVAAAVWLATVCLVASCANADPLGSATGSVKSIVVGSGDFPESQVIAEIYAQVLQANGFDVGRRLGIGSR
ETYILALKDHSIDLVPEYIGNLLLYFQPDATVTMLDAVELELYKRLPGDLSILTPSPASDTDTVTVTAATAARWNLKTIA
DLAPHSADVKFAAPSAFQTRPSGLPGLRHKYSLDIAPGNFVTINDGGGAVTVRALVEGTATAANLFSTSAAIPQNHLVVL
EDPEHNFLAGNIVPLVNSRKKSDHLKDVLDAVSAKLTTAGLAELNAAVSGNSGVDPDQAARKWVRDNGFDHPVRQ
>Mature_315_residues
MRMLRRLRRATVAAAVWLATVCLVASCANADPLGSATGSVKSIVVGSGDFPESQVIAEIYAQVLQANGFDVGRRLGIGSR
ETYILALKDHSIDLVPEYIGNLLLYFQPDATVTMLDAVELELYKRLPGDLSILTPSPASDTDTVTVTAATAARWNLKTIA
DLAPHSADVKFAAPSAFQTRPSGLPGLRHKYSLDIAPGNFVTINDGGGAVTVRALVEGTATAANLFSTSAAIPQNHLVVL
EDPEHNFLAGNIVPLVNSRKKSDHLKDVLDAVSAKLTTAGLAELNAAVSGNSGVDPDQAARKWVRDNGFDHPVRQ

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=305, Percent_Identity=24.9180327868852, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33358; Mature: 33358

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMLRRLRRATVAAAVWLATVCLVASCANADPLGSATGSVKSIVVGSGDFPESQVIAEIY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
AQVLQANGFDVGRRLGIGSRETYILALKDHSIDLVPEYIGNLLLYFQPDATVTMLDAVEL
HHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCEECHHHHCCEEEEECCCCCEEEHHHHHH
ELYKRLPGDLSILTPSPASDTDTVTVTAATAARWNLKTIADLAPHSADVKFAAPSAFQTR
HHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCCCC
PSGLPGLRHKYSLDIAPGNFVTINDGGGAVTVRALVEGTATAANLFSTSAAIPQNHLVVL
CCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEEHHCCHHHHHHHHHHCCCCCCCEEEE
EDPEHNFLAGNIVPLVNSRKKSDHLKDVLDAVSAKLTTAGLAELNAAVSGNSGVDPDQAA
ECCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH
RKWVRDNGFDHPVRQ
HHHHHCCCCCCCCCC
>Mature Secondary Structure
MRMLRRLRRATVAAAVWLATVCLVASCANADPLGSATGSVKSIVVGSGDFPESQVIAEIY
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHH
AQVLQANGFDVGRRLGIGSRETYILALKDHSIDLVPEYIGNLLLYFQPDATVTMLDAVEL
HHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCEECHHHHCCEEEEECCCCCEEEHHHHHH
ELYKRLPGDLSILTPSPASDTDTVTVTAATAARWNLKTIADLAPHSADVKFAAPSAFQTR
HHHHHCCCCEEEECCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCCEEEECCCCCCCC
PSGLPGLRHKYSLDIAPGNFVTINDGGGAVTVRALVEGTATAANLFSTSAAIPQNHLVVL
CCCCCCCCCEEEEEECCCCEEEEECCCCEEEEEEEHHCCHHHHHHHHHHCCCCCCCEEEE
EDPEHNFLAGNIVPLVNSRKKSDHLKDVLDAVSAKLTTAGLAELNAAVSGNSGVDPDQAA
ECCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHH
RKWVRDNGFDHPVRQ
HHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]