| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is tyrA [H]
Identifier: 148824959
GI number: 148824959
Start: 4213356
End: 4214327
Strand: Direct
Name: tyrA [H]
Synonym: TBFG_13786
Alternate gene names: 148824959
Gene position: 4213356-4214327 (Clockwise)
Preceding gene: 148824956
Following gene: 148824965
Centisome position: 95.23
GC content: 67.39
Gene sequence:
>972_bases GTGACTCGGACTGTCGCGGCGCCACCGGTGTGCGTGCTTGGGCTGGGACTCATCGGCGGTTCCATCATGCGGGCCGCCGC AGCGGCGGGCCGTGAAGTCTTTGGCTACAACCGGTCGGTGGAGGGTGCCCACGGCGCCCGCTCCGACGGGTTTGATGCCA TAACCGATCTCAACCAAACGCTAACCCGGGCCGCCGCTACCGAGGCGTTGATCGTGCTGGCCGTTCCGATGCCGGCCTTG CCAGGCATGCTCGCCCATATTCGCAAATCGGCACCTGGCTGTCCGTTGACCGACGTCACCAGCGTCAAATGCGCGGTTCT CGACGAGGTCACGGCGGCTGGTCTGCAGGCGCGCTACGTCGGCGGTCACCCGATGACGGGCACCGCGCACTCGGGTTGGA CCGCCGGTCACGGCGGCTTGTTCAACAGAGCCCCCTGGGTGGTCAGCGTCGATGACCATGTCGACCCCACGGTGTGGTCG ATGGTGATGACGCTGGCGCTGGACTGCGGGGCGATGGTGGTGCCCGCCAAATCCGACGAGCACGACGCCGCCGCTGCTGC CGTCTCGCACCTGCCACACCTGCTCGCTGAGGCGCTCGCCGTCACTGCGGCCGAGGTACCACTTGCCTTCGCGTTGGCTG CAGGGTCTTTCCGCGATGCCACCCGGGTGGCAGCCACCGCTCCTGACCTAGTGCGGGCAATGTGTGAAGCTAACACCGGC CAACTGGCGCCGGCCGCGGACCGGATCATCGACCTGCTGAGCCGTGCGCGTGATTCGCTGCAATCCCACGGTTCGATAGC CGACCTCGCCGACGCGGGCCACGCCGCACGCACACGCTATGACAGCTTCCCGCGCTCCGACATCGTCACCGTCGTTATTG GCGCGGACAAATGGCGCGAGCAACTGGCCGCCGCGGGGCGGGCGGGCGGGGTGATTACATCCGCTCTGCCAAGCCTGGAT AGTCCACAATGA
Upstream 100 bases:
>100_bases TAGTCGCTGACCAGGCCTCCTGACCAGATGGTGCTCAGACAGCGGAGATCTGGTCGCCCCTCAGGGCGCCGCCACGGGCT ACCTATGCCAACCTTGGACT
Downstream 100 bases:
>100_bases ACCCGTCGGAGTCGACGGTCACGGTGGTGTCAGCCACCGGTGAGCGCAGCTTGATCCCATCCAGACGTCCTTCGCTGGTA TAGCTCACGGTGGCCGCATC
Product: prephenate dehydrogenase
Products: NA
Alternate protein names: PDH [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MTRTVAAPPVCVLGLGLIGGSIMRAAAAAGREVFGYNRSVEGAHGARSDGFDAITDLNQTLTRAAATEALIVLAVPMPAL PGMLAHIRKSAPGCPLTDVTSVKCAVLDEVTAAGLQARYVGGHPMTGTAHSGWTAGHGGLFNRAPWVVSVDDHVDPTVWS MVMTLALDCGAMVVPAKSDEHDAAAAAVSHLPHLLAEALAVTAAEVPLAFALAAGSFRDATRVAATAPDLVRAMCEANTG QLAPAADRIIDLLSRARDSLQSHGSIADLADAGHAARTRYDSFPRSDIVTVVIGADKWREQLAAAGRAGGVITSALPSLD SPQ
Sequences:
>Translated_323_residues MTRTVAAPPVCVLGLGLIGGSIMRAAAAAGREVFGYNRSVEGAHGARSDGFDAITDLNQTLTRAAATEALIVLAVPMPAL PGMLAHIRKSAPGCPLTDVTSVKCAVLDEVTAAGLQARYVGGHPMTGTAHSGWTAGHGGLFNRAPWVVSVDDHVDPTVWS MVMTLALDCGAMVVPAKSDEHDAAAAAVSHLPHLLAEALAVTAAEVPLAFALAAGSFRDATRVAATAPDLVRAMCEANTG QLAPAADRIIDLLSRARDSLQSHGSIADLADAGHAARTRYDSFPRSDIVTVVIGADKWREQLAAAGRAGGVITSALPSLD SPQ >Mature_322_residues TRTVAAPPVCVLGLGLIGGSIMRAAAAAGREVFGYNRSVEGAHGARSDGFDAITDLNQTLTRAAATEALIVLAVPMPALP GMLAHIRKSAPGCPLTDVTSVKCAVLDEVTAAGLQARYVGGHPMTGTAHSGWTAGHGGLFNRAPWVVSVDDHVDPTVWSM VMTLALDCGAMVVPAKSDEHDAAAAAVSHLPHLLAEALAVTAAEVPLAFALAAGSFRDATRVAATAPDLVRAMCEANTGQ LAPAADRIIDLLSRARDSLQSHGSIADLADAGHAARTRYDSFPRSDIVTVVIGADKWREQLAAAGRAGGVITSALPSLDS PQ
Specific function: Unknown
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR002912 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01842 ACT; PF02153 PDH [H]
EC number: =1.3.1.12 [H]
Molecular weight: Translated: 33099; Mature: 32968
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTVAAPPVCVLGLGLIGGSIMRAAAAAGREVFGYNRSVEGAHGARSDGFDAITDLNQT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH LTRAAATEALIVLAVPMPALPGMLAHIRKSAPGCPLTDVTSVKCAVLDEVTAAGLQARYV HHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE GGHPMTGTAHSGWTAGHGGLFNRAPWVVSVDDHVDPTVWSMVMTLALDCGAMVVPAKSDE CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCC HDAAAAAVSHLPHLLAEALAVTAAEVPLAFALAAGSFRDATRVAATAPDLVRAMCEANTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCC QLAPAADRIIDLLSRARDSLQSHGSIADLADAGHAARTRYDSFPRSDIVTVVIGADKWRE CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCEEEEEECCHHHHH QLAAAGRAGGVITSALPSLDSPQ HHHHCCCCCCHHHHHCCCCCCCC >Mature Secondary Structure TRTVAAPPVCVLGLGLIGGSIMRAAAAAGREVFGYNRSVEGAHGARSDGFDAITDLNQT CCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH LTRAAATEALIVLAVPMPALPGMLAHIRKSAPGCPLTDVTSVKCAVLDEVTAAGLQARYV HHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEE GGHPMTGTAHSGWTAGHGGLFNRAPWVVSVDDHVDPTVWSMVMTLALDCGAMVVPAKSDE CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCC HDAAAAAVSHLPHLLAEALAVTAAEVPLAFALAAGSFRDATRVAATAPDLVRAMCEANTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCC QLAPAADRIIDLLSRARDSLQSHGSIADLADAGHAARTRYDSFPRSDIVTVVIGADKWRE CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCCCEEEEEECCHHHHH QLAAAGRAGGVITSALPSLDSPQ HHHHCCCCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA