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The map label for this gene is ybaB [C]

Identifier: 148824921

GI number: 148824921

Start: 4173513

End: 4173896

Strand: Reverse

Name: ybaB [C]

Synonym: TBFG_13748

Alternate gene names: 148824921

Gene position: 4173896-4173513 (Counterclockwise)

Preceding gene: 148824923

Following gene: 148824920

Centisome position: 94.34

GC content: 67.97

Gene sequence:

>384_bases
ATGTCGGCGCTGCTCGCTCAGGCGCAGCAGATGCAGCAAAAGCTCCTGGAGGCCCAGCAACAGCTGGCGAACTCTGAGGT
GCACGGTCAAGCCGGTGGGGGCCTGGTCAAGGTCGTCGTCAAAGGCAGCGGGGAGGTGATCGGCGTGACGATCGACCCCA
AGGTCGTCGATCCCGACGACATCGAGACCTTGCAGGACCTGATCGTCGGTGCGATGCGCGACGCGTCCCAGCAGGTGACG
AAGATGGCGCAGGAACGGCTGGGTGCATTGGCCGGCGCGATGCGCCCGCCGGCACCACCGGCTGCGCCGCCGGGAGCGCC
AGGTATGCCGGGTATGCCGGGTATGCCGGGTGCGCCGGGCGCACCACCTGTACCAGGGATCTGA

Upstream 100 bases:

>100_bases
GGCGCGGTCTAGGCTGAATGTTCCGAATCGCCCGACAACCACAGGCGAAACCAACTCGAGACCAAGATGCTAGGGGACTG
TCATGCAACCCGGAGGCGAC

Downstream 100 bases:

>100_bases
CCTGCACCGACATGTTTGAGGGACCCGTCCAGGACCTGATTGACGAACTCGGCAAGTTGCCGGGGATCGGACCCAAGAGT
GCGCAGCGAATCGCCTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSALLAQAQQMQQKLLEAQQQLANSEVHGQAGGGLVKVVVKGSGEVIGVTIDPKVVDPDDIETLQDLIVGAMRDASQQVT
KMAQERLGALAGAMRPPAPPAAPPGAPGMPGMPGMPGAPGAPPVPGI

Sequences:

>Translated_127_residues
MSALLAQAQQMQQKLLEAQQQLANSEVHGQAGGGLVKVVVKGSGEVIGVTIDPKVVDPDDIETLQDLIVGAMRDASQQVT
KMAQERLGALAGAMRPPAPPAAPPGAPGMPGMPGMPGAPGAPPVPGI
>Mature_126_residues
SALLAQAQQMQQKLLEAQQQLANSEVHGQAGGGLVKVVVKGSGEVIGVTIDPKVVDPDDIETLQDLIVGAMRDASQQVTK
MAQERLGALAGAMRPPAPPAAPPGAPGMPGMPGMPGAPGAPPVPGI

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=94, Percent_Identity=38.2978723404255, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3716_MYCTU (P0A654)

Other databases:

- EMBL:   BX842583
- EMBL:   AE000516
- PIR:   E70795
- RefSeq:   NP_218233.1
- RefSeq:   NP_338374.1
- ProteinModelPortal:   P0A654
- SMR:   P0A654
- EnsemblBacteria:   EBMYCT00000003786
- EnsemblBacteria:   EBMYCT00000070618
- GeneID:   885595
- GeneID:   922679
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT3819
- KEGG:   mtu:Rv3716c
- TIGR:   MT3819
- TubercuList:   Rv3716c
- GeneTree:   EBGT00050000015096
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- ProtClustDB:   PRK00153
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 12772; Mature: 12641

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALLAQAQQMQQKLLEAQQQLANSEVHGQAGGGLVKVVVKGSGEVIGVTIDPKVVDPDD
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHH
IETLQDLIVGAMRDASQQVTKMAQERLGALAGAMRPPAPPAAPPGAPGMPGMPGMPGAPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPVPGI
CCCCCCC
>Mature Secondary Structure 
SALLAQAQQMQQKLLEAQQQLANSEVHGQAGGGLVKVVVKGSGEVIGVTIDPKVVDPDD
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCHH
IETLQDLIVGAMRDASQQVTKMAQERLGALAGAMRPPAPPAAPPGAPGMPGMPGMPGAPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPVPGI
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036; 11681203