| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824834
Identifier: 148824834
GI number: 148824834
Start: 4082178
End: 4083473
Strand: Direct
Name: 148824834
Synonym: TBFG_13661
Alternate gene names: NA
Gene position: 4082178-4083473 (Clockwise)
Preceding gene: 148824832
Following gene: 148824835
Centisome position: 92.26
GC content: 67.44
Gene sequence:
>1296_bases TTGGCCGTTGGCGCCGCCGCGGTGACCGAAGTCGGCGATACGGCATCTCCTGTTGGCTCCTCGGGCGCCTCTGGCGGAGC TATCGCAAGCGGCAGCGTAGCCCGGGTCGGCACGGCGACCGCGGTTACCGCGCTGTGCGGCTACGCGGTGATTTATCTGG CGGCCCGCAACCTGGCTCCCAACGGCTTCTCGGTATTCGGGGTGTTCTGGGGCGCATTCGGACTGGTCACCGGGGCCGCC AACGGCCTGCTGCAAGAAACCACCCGCGAGGTCCGCTCGCTGGGGTACTTGGACGTCTCTGCAGACGGCCGCCGTACCCA TCCGCTGCGGGTCTCCGGGATGGTCGGCCTCGGCTCGTTGGTCGTGATCGCCGGTAGCTCACCGTTGTGGAGCGGGCGGG TATTCGCCGAGGCGCGCTGGCTATCGGTCGCATTGCTCAGCATCGGGCTGGCTGGGTTTTGCCTACACGCCACCCTGCTG GGCATGCTGGCCGGCACCAACCGGTGGACCCAGTACGGCGCGCTGATGGTGGCCGACGCGGTCATCCGGGTGGTGGTCGC CGCGGCCACGTTCGTGATCGGATGGCAGCTGGTCGGGTTCATCTGGGCAACCGTGGCGGGTTCGGTTGCCTGGCTGATCA TGTTGATGACCTCACCCCCGACACGCGCGGCCGCCCGCTTGATGACGCCCGGCGCTACTGCGACATTCCTGAGGGGCGCC GCCCATTCGATCATCGCGGCCGGTGCCAGCGCGATATTGGTGATGGGGTTTCCGGTCTTGCTGAAGCTAACCTCCAATGA ACTGGGCGCGCAGGGAGGCGTTGTCATCCTTGCGGTGACGTTAACCCGGGCGCCACTGCTGGTGCCACTGACCGCCATGC AAGGCAACCTCATCGCGCATTTCGTCGATGAACGCACCGAGCGGATTCGGGCGCTAATCGCGCCGGCGGCGCTCATCGGC GGCGTTGGCGCAGTCGGGATGCTGGCGGCCGGCGTCGTAGGTCCATGGATTATGCGCGTCGCGTTCGGGTCGGAATACCA GTCCAGCAGCGCATTGCTGGCCTGGTTGACGGCGGCCGCGGTGGCGATCGCAATGCTGACACTCACCGGTGCCGCCGCGG TCGCGGCCGCACTGCACCGGGCGTATTCGCTGGGCTGGGTTGGTGCGACGGTTGGGTCGGGCTTGTTGCTGCTGCTGCCG CTGTCCTTGGAGACCCGCACCGTGGTCGCGTTGTTATGCGGTCCGCTGGTGGGAATCGGCGTCCATTTGGTGGCGCTGGC GCGGACGGACGAGTAA
Upstream 100 bases:
>100_bases CCCACAATAGCGACGAACCGACATCAATTGGTCAGGCTCGCGCCGCGCAGCGCGGCCAACCGGCCCGCCTACTATTTTCA GTCGTGACGATCCATGTCGG
Downstream 100 bases:
>100_bases GCGGCCGATCAGCCCCGGACCAACGTGTAACTTGTGGGCTTAAATGGCCTCGAAAATGGACACTGAAACGCACTACTCGG ACGTCTGGGTCGTCATTCCC
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MAVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAPNGFSVFGVFWGAFGLVTGAA NGLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSLVVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLL GMLAGTNRWTQYGALMVADAVIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGA AHSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDERTERIRALIAPAALIG GVGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLP LSLETRTVVALLCGPLVGIGVHLVALARTDE
Sequences:
>Translated_431_residues MAVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAPNGFSVFGVFWGAFGLVTGAA NGLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSLVVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLL GMLAGTNRWTQYGALMVADAVIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGA AHSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDERTERIRALIAPAALIG GVGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLP LSLETRTVVALLCGPLVGIGVHLVALARTDE >Mature_430_residues AVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAPNGFSVFGVFWGAFGLVTGAAN GLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSLVVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLLG MLAGTNRWTQYGALMVADAVIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGAA HSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAHFVDERTERIRALIAPAALIGG VGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAAVAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLPL SLETRTVVALLCGPLVGIGVHLVALARTDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1510 and M.bovis Mb3654 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43516; Mature: 43385
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAP CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC NGFSVFGVFWGAFGLVTGAANGLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCEE VVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLLGMLAGTNRWTQYGALMVADA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH AHSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAH HHHHHHHCHHHHHHHCCHHHEEECCCCCCCCCCEEEEEEECCCCCCEEEEHHHCCCHHHH FVDERTERIRALIAPAALIGGVGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLPLSLETRTVVALLCGPLVGIG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH VHLVALARTDE HHHEEEEECCC >Mature Secondary Structure AVGAAAVTEVGDTASPVGSSGASGGAIASGSVARVGTATAVTALCGYAVIYLAARNLAP CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC NGFSVFGVFWGAFGLVTGAANGLLQETTREVRSLGYLDVSADGRRTHPLRVSGMVGLGSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEECCCCCCEE VVIAGSSPLWSGRVFAEARWLSVALLSIGLAGFCLHATLLGMLAGTNRWTQYGALMVADA EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VIRVVVAAATFVIGWQLVGFIWATVAGSVAWLIMLMTSPPTRAAARLMTPGATATFLRGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHH AHSIIAAGASAILVMGFPVLLKLTSNELGAQGGVVILAVTLTRAPLLVPLTAMQGNLIAH HHHHHHHCHHHHHHHCCHHHEEECCCCCCCCCCEEEEEEECCCCCCEEEEHHHCCCHHHH FVDERTERIRALIAPAALIGGVGAVGMLAAGVVGPWIMRVAFGSEYQSSSALLAWLTAAA HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VAIAMLTLTGAAAVAAALHRAYSLGWVGATVGSGLLLLLPLSLETRTVVALLCGPLVGIG HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHH VHLVALARTDE HHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]