Click here to switch to the map view.

The map label for this gene is kstR [H]

Identifier: 148824779

GI number: 148824779

Start: 4028977

End: 4029864

Strand: Direct

Name: kstR [H]

Synonym: TBFG_13607

Alternate gene names: 148824779

Gene position: 4028977-4029864 (Clockwise)

Preceding gene: 148824778

Following gene: 148824782

Centisome position: 91.06

GC content: 62.39

Gene sequence:

>888_bases
GTGACGGTCGCTACCACCTGCAGACCTCCGCGTCGACAATTTCACATAGCAATGGAGCGTTCTTGCCCACTAGAACGTGT
TCTAATAGTGCTAACGATCAACCGTCAAGTCGAAGGCAATAACTCCAGCACATGTCGTCGTCTCGGCTGTCGGGAGGTGG
GAAATCTACACACAGCATGCGTATCGTTTGCAAACGAACCGCCCGGAAGAGGAGCTGCCCGCTACATGTCGTCAGCGAAC
ACGAACACCAGTAGCGCTCCCGACGCACCACCTCGCGCGGTCATGAAAGTGGCGGTACTTGCCGAGTCCGAGCTCGGATC
GGAGGCACAGCGGGAGCGCCGCAAGCGCATCTTGGACGCCACCATGGCTATCGCGTCCAAAGGCGGCTATGAGGCGGTGC
AGATGCGCGCCGTCGCCGACCGCGCCGACGTCGCGGTTGGCACGCTGTACCGGTACTTCCCGTCGAAGGTGCATCTGCTG
GTGTCGGCGCTGGGTCGGGAATTCAGCCGCATCGACGCGAAAACCGACCGCTCCGCGGTCGCCGGGGCCACCCCCTTCCA
GCGGCTGAACTTTATGGTCGGCAAGCTCAACCGCGCGATGCAACGCAATCCGCTACTCACCGAGGCCATGACACGTGCCT
ACGTGTTCGCCGACGCCTCGGCGGCCAGCGAGGTCGACCAGGTCGAAAAGCTCATCGACAGTATGTTCGCGCGTGCAATG
GCCAACGGCGAACCAACCGAGGACCAGTACCACATAGCGCGGGTGATCTCGGACGTGTGGTTGTCGAACCTGCTCGCGTG
GCTTACCCGACGAGCCTCGGCTACCGACGTCAGCAAGCGGCTGGACCTGGCCGTGCGGCTGCTGATCGGCGATCAAGACA
GCGCCTAG

Upstream 100 bases:

>100_bases
GCCGTATTCCATGTCGCGGACCGCCGCAGTCGCGGCCGCACCTGAGGCCGCGGTGCGGGCCCAGCCGCGCACCAACTCAC
GAGCCGCGGATTGTTCGTCG

Downstream 100 bases:

>100_bases
AAGACTTACGCCGGCGGACCCGCGGTGCGGCCCCGGACCAGCTCGGTATCGAGCACCTCGATGACGGGCAGTCCGGACCG
CGGCGGCTTCAGCAATAGCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTVATTCRPPRRQFHIAMERSCPLERVLIVLTINRQVEGNNSSTCRRLGCREVGNLHTACVSFANEPPGRGAARYMSSAN
TNTSSAPDAPPRAVMKVAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLL
VSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAM
ANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIGDQDSA

Sequences:

>Translated_295_residues
MTVATTCRPPRRQFHIAMERSCPLERVLIVLTINRQVEGNNSSTCRRLGCREVGNLHTACVSFANEPPGRGAARYMSSAN
TNTSSAPDAPPRAVMKVAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLL
VSALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAM
ANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIGDQDSA
>Mature_294_residues
TVATTCRPPRRQFHIAMERSCPLERVLIVLTINRQVEGNNSSTCRRLGCREVGNLHTACVSFANEPPGRGAARYMSSANT
NTSSAPDAPPRAVMKVAVLAESELGSEAQRERRKRILDATMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLV
SALGREFSRIDAKTDRSAVAGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAMA
NGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIGDQDSA

Specific function: Controls the expression of genes used for utilizing diverse lipids as energy sources [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 32403; Mature: 32272

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVATTCRPPRRQFHIAMERSCPLERVLIVLTINRQVEGNNSSTCRRLGCREVGNLHTAC
CCCCCCCCCCHHHHEEHHHCCCCHHHEEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHH
VSFANEPPGRGAARYMSSANTNTSSAPDAPPRAVMKVAVLAESELGSEAQRERRKRILDA
HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTDRSAV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAM
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHH
ANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIGDQDSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure 
TVATTCRPPRRQFHIAMERSCPLERVLIVLTINRQVEGNNSSTCRRLGCREVGNLHTAC
CCCCCCCCCHHHHEEHHHCCCCHHHEEEEEEECCEECCCCCHHHHHHHHHHHHHHHHHH
VSFANEPPGRGAARYMSSANTNTSSAPDAPPRAVMKVAVLAESELGSEAQRERRKRILDA
HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
TMAIASKGGYEAVQMRAVADRADVAVGTLYRYFPSKVHLLVSALGREFSRIDAKTDRSAV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
AGATPFQRLNFMVGKLNRAMQRNPLLTEAMTRAYVFADASAASEVDQVEKLIDSMFARAM
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHH
ANGEPTEDQYHIARVISDVWLSNLLAWLTRRASATDVSKRLDLAVRLLIGDQDSA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]