| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is 148824677
Identifier: 148824677
GI number: 148824677
Start: 3897909
End: 3898628
Strand: Direct
Name: 148824677
Synonym: TBFG_13504
Alternate gene names: NA
Gene position: 3897909-3898628 (Clockwise)
Preceding gene: 148824676
Following gene: 148824682
Centisome position: 88.1
GC content: 67.36
Gene sequence:
>720_bases GTGCTAGCCAAACTGGCCGCCCCCGGCGCGACCAACCCCGACGACCACACCCCGGTCATCGACACCACCCCCGATGCGGC CGCCATCGACCGCGACACCCGCAGCCAAGCCCAACGCAACCACGACGGGCTGCTGGCCGGGCTGCGCGCGCTGATCGCCT CCGGGAAACTGGGCCAACACAACGGTCTTCCCGTCTCGATCGTGGTCACCACCACCCTGACCGACCTGCAAACCGGCGCC GGCAAGGGCTTCACCGGCGGCGGCACCCTGCTACCCATGGCCGATGTGATCCGCATGACCAGCCACGCCCACCACTACTC CCCCGCAAGCGGGAGGTACCCCCAGGCGATCTTCGACCACGGCACACCCCTGGCGCTGTATCACACCAAACGCCTAGCCT CCCCGGCCCAGCGGATCATGCTGTTCGCCAACGACCGCGGCTGCACCAAACCCGGCTGTGACGCACCGGCCTACCACAGC CAAGCCCACCACGTCACCGCCTGGACCAGCACCGGACGCACCGACATCACCGAGCTGACCCTGGCCTGCGACCCCGACAA CCGACTCGCCGAAAAAGGCTGGACCACCCACAAAAACACCCACGGCCACACCGAATGGCTACCACCACCCCACCTCGACC ACGGCCAACCCCGCACCAACACCTTCCACCACCCCGAACGATTCCTCCACAACCAAGACGACGACGACGAACCCGATTGA
Upstream 100 bases:
>100_bases CGCCCGCAAACGCGGCATCACCCTGAGCAACCAGCAATACGACGGCATGTCACGGCTAAGTGGCTACCTGACCCCCCAAG CGCGGGCCACCTTTGAAGCC
Downstream 100 bases:
>100_bases CCCCCAGCAGTCAAAGCCACACGCCACAACGCCGCACAACCATAAACACCGAGTCCGTCAGGGCCTGGCCGGAGCAAACA CGCCACGGTGGTAGGAGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQTGA GKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHS QAHHVTAWTSTGRTDITELTLACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHPERFLHNQDDDDEPD
Sequences:
>Translated_239_residues MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQTGA GKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHS QAHHVTAWTSTGRTDITELTLACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHPERFLHNQDDDDEPD >Mature_239_residues MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQHNGLPVSIVVTTTLTDLQTGA GKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDHGTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHS QAHHVTAWTSTGRTDITELTLACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHPERFLHNQDDDDEPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003870 - InterPro: IPR003615 [H]
Pfam domain/function: PF02720 DUF222 [H]
EC number: NA
Molecular weight: Translated: 25900; Mature: 25900
Theoretical pI: Translated: 6.83; Mature: 6.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQH CCCCCCCCCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCC NGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDH CCCCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC GTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQAHHVTAWTSTGRTDITELT CCEEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE LACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHPERFLHNQDDDDEPD EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MLAKLAAPGATNPDDHTPVIDTTPDAAAIDRDTRSQAQRNHDGLLAGLRALIASGKLGQH CCCCCCCCCCCCCCCCCCCEECCCCHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCC NGLPVSIVVTTTLTDLQTGAGKGFTGGGTLLPMADVIRMTSHAHHYSPASGRYPQAIFDH CCCCEEEEEEEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCC GTPLALYHTKRLASPAQRIMLFANDRGCTKPGCDAPAYHSQAHHVTAWTSTGRTDITELT CCEEEEEHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEE LACDPDNRLAEKGWTTHKNTHGHTEWLPPPHLDHGQPRTNTFHHPERFLHNQDDDDEPD EEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]