| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824641
Identifier: 148824641
GI number: 148824641
Start: 3863005
End: 3863850
Strand: Reverse
Name: 148824641
Synonym: TBFG_13468
Alternate gene names: NA
Gene position: 3863850-3863005 (Counterclockwise)
Preceding gene: 148824642
Following gene: 148824640
Centisome position: 87.33
GC content: 64.54
Gene sequence:
>846_bases GTGTTTGCCGAGCTGATCCGTGCCGGGTTGCAGGCGTTGATCGAGGCCGAAGCCACCGAGGCGATCGGTGCAGGCCGCTA CGAGCGCTCCGATGGGCGCATCGTGCACCGCAATGGGCACCGGCCCAAGACAGTGTCGACCACGGCCGGCGATATCGAGG TGCAGATCCCCAAGCTGCGGGCCGGTTCGTTCTTCCCGTCGCTTTTGGAGCGGCGCCGCCGCATCGATAAAGCGTTGCAC GCGGTGATCATGGAGGCCTACGTGCACGGGGTATCGACGCGCAGTGTCGATGATCTGGTGGCCGCGATGGGCGTGCAGGC CGGGGTGTCTAAATCCGAGGTCTCACGCATCTGCGCCGGTCTGGACACCGAGATCGAGGCGTTTCGGACCCGCAGCTTGA CCCACACCGAGTTCCCGTATGTGTTCTGCGATGCGACCTTCTGCAAGGTGCGTGTCGGGGCGCACGTGGTGTCTCAGGCT CTGGTGGTGGCCACCGGGGTGTCCATCGACGGCACCCGCGAAGTGTTGGGCACCGCTGTGGGTGACAGCGAGTCTTACGA GTTCTGGCGTGAGTTTTTGGCCTCACTGAAAGCGCGTGGGCTGACCGGGGTGCATCTGGTGATCTCCGATGCCCATGCTG GGCTGAAAGCCGCTGTGGCACAACAGTTCAGTGGGGCGTCGTGGCAGCGTTGCCGGGTGCATTTCATGCGAAACCTGTAC ACCGCGGTAGCGGCCAAACACGCCCCGGCGGTGACCGTGGCGGTCAAGACGATTTTCGCCCACACCGACCCTGAGGAGGT CGGCGCTCAGTGGGACCGCGTCGCCGACCCTCTCTGTCAACCTTGA
Upstream 100 bases:
>100_bases GGTTTGGAAACGGGCAGGGTCGAAGCCCAGCGTCGAAAGCCCCGTTGGGGGAAGCAACTGAGCGGTCCGTAACGCGAGTG AAGCTGCTGATGCCTCGGCG
Downstream 100 bases:
>100_bases GTGAGACACTGCGAGTGGAGATGTTTACTGAGCCTGAGGGCGAGTACGAAGAGAACGAGGTTGACTAATAGGGCTGGTAC TGGCCGACGGGGTTCGTCGG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MFAELIRAGLQALIEAEATEAIGAGRYERSDGRIVHRNGHRPKTVSTTAGDIEVQIPKLRAGSFFPSLLERRRRIDKALH AVIMEAYVHGVSTRSVDDLVAAMGVQAGVSKSEVSRICAGLDTEIEAFRTRSLTHTEFPYVFCDATFCKVRVGAHVVSQA LVVATGVSIDGTREVLGTAVGDSESYEFWREFLASLKARGLTGVHLVISDAHAGLKAAVAQQFSGASWQRCRVHFMRNLY TAVAAKHAPAVTVAVKTIFAHTDPEEVGAQWDRVADPLCQP
Sequences:
>Translated_281_residues MFAELIRAGLQALIEAEATEAIGAGRYERSDGRIVHRNGHRPKTVSTTAGDIEVQIPKLRAGSFFPSLLERRRRIDKALH AVIMEAYVHGVSTRSVDDLVAAMGVQAGVSKSEVSRICAGLDTEIEAFRTRSLTHTEFPYVFCDATFCKVRVGAHVVSQA LVVATGVSIDGTREVLGTAVGDSESYEFWREFLASLKARGLTGVHLVISDAHAGLKAAVAQQFSGASWQRCRVHFMRNLY TAVAAKHAPAVTVAVKTIFAHTDPEEVGAQWDRVADPLCQP >Mature_281_residues MFAELIRAGLQALIEAEATEAIGAGRYERSDGRIVHRNGHRPKTVSTTAGDIEVQIPKLRAGSFFPSLLERRRRIDKALH AVIMEAYVHGVSTRSVDDLVAAMGVQAGVSKSEVSRICAGLDTEIEAFRTRSLTHTEFPYVFCDATFCKVRVGAHVVSQA LVVATGVSIDGTREVLGTAVGDSESYEFWREFLASLKARGLTGVHLVISDAHAGLKAAVAQQFSGASWQRCRVHFMRNLY TAVAAKHAPAVTVAVKTIFAHTDPEEVGAQWDRVADPLCQP
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 30484; Mature: 30484
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAELIRAGLQALIEAEATEAIGAGRYERSDGRIVHRNGHRPKTVSTTAGDIEVQIPKLR CHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCEEECCCCCEEEEECCCC AGSFFPSLLERRRRIDKALHAVIMEAYVHGVSTRSVDDLVAAMGVQAGVSKSEVSRICAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHC LDTEIEAFRTRSLTHTEFPYVFCDATFCKVRVGAHVVSQALVVATGVSIDGTREVLGTAV CCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC GDSESYEFWREFLASLKARGLTGVHLVISDAHAGLKAAVAQQFSGASWQRCRVHFMRNLY CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH TAVAAKHAPAVTVAVKTIFAHTDPEEVGAQWDRVADPLCQP HHHHHHCCCHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCC >Mature Secondary Structure MFAELIRAGLQALIEAEATEAIGAGRYERSDGRIVHRNGHRPKTVSTTAGDIEVQIPKLR CHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCEEECCCCCEEEEECCCC AGSFFPSLLERRRRIDKALHAVIMEAYVHGVSTRSVDDLVAAMGVQAGVSKSEVSRICAG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHC LDTEIEAFRTRSLTHTEFPYVFCDATFCKVRVGAHVVSQALVVATGVSIDGTREVLGTAV CCHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC GDSESYEFWREFLASLKARGLTGVHLVISDAHAGLKAAVAQQFSGASWQRCRVHFMRNLY CCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH TAVAAKHAPAVTVAVKTIFAHTDPEEVGAQWDRVADPLCQP HHHHHHCCCHHHHHHHHHHHCCCHHHHCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1663885; 12788972 [H]