| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824633
Identifier: 148824633
GI number: 148824633
Start: 3855175
End: 3857259
Strand: Reverse
Name: 148824633
Synonym: TBFG_13460
Alternate gene names: NA
Gene position: 3857259-3855175 (Counterclockwise)
Preceding gene: 148824637
Following gene: 148824630
Centisome position: 87.18
GC content: 65.18
Gene sequence:
>2085_bases GTGGCCACGATAGCCCAACGGCTGCGTGACGACCACGGGGTGGCGGCGTCGGAGTCGTCGGTGAGGCGTTGGATCGCAAC GCATTTCGCCGAGGAGGTGGCCCGCGAGAGAGTCACGGTGCCGCGCGGACCGGTCGATGCGGGTAGTGAGGCGCAGATCG ATTACGGGCGGCTGGGCATGTGGTTCGACCCGGCCACCGCGCGCCGGGTCGCGGTGTGGGCGTTCGTGATGGTGCTGGCG TTCTCCCGACACCTGTTCGTGCGTCCGGTCATCCGGATGGACCAAACCGCTTGGTGTGCTTGCCATGTCGCCGCATTCGA ATTCTTCGACGGGGTGCCGGCGCGGCTAGTGTGTGACAACCTCAGGACCGGGGTGGACAAGCCCGACCTGTACGACCCGC AGATCAACCGCTCCTACGCCGAGCTGGCCAGCCACTACGCCACGCTGGTCGACCCGGCCCGCGCCAGAAAACCCAAAGAT AAACCCCGCGTGGAGCGGCCGATGACCTATGTGCGGGACTCGTTTTGGAAAGGCCGCGAGTTCGATTCGCTGGCCCAGAT GCAGCAGGCGGCGGTCACCTGGAGCACCGAAGTGGCCGGGCTTCGGTACTTACGTGCCTTGGAGGGCGCCCAACCCCTGC GGATGTTCGAAGCTGTGGAGCAACAAGCGTTGATCGCATTGCCGCCCAGGGCATTTGAACTCACCAGCTGGTCGATCGGC ACCGTCGGGGTGGACACGCACCTCAAAGTTGGCAAGGCACTCTATTCCGTGCCGTGGCGGCTGATCGGGCAACGCCTGCA CGCGCGCACCGCCGGTGATGTGGTGCAGATCTTCGCCGGCAACGATGTGGTGGCCACCCATGTGCGCCGACCCAGCGGGC GCTCCACCGACTTCTCCCACTACCCACCGGAGAAGATCGCCTTCCACATGCGCACCCCGACCTGGTGTCGACACACCGCC GAACTGGTCGGCCCAGCCTGCCAGCAAGTGATCGCCGAATTCATGCGCGACAACGCCATCCACCACCTACGGTCGGCCCA AGGCGTGCTCGGGCTACGCGACAAACACGGCTGCGACCGGCTGGAGGCCGCCTGCGCCCGCGCCATCGAGGTCGGCGACC CGAGCTATCGCACCATCAAGGGCATCCTTGTTGCCGGCACCGAACACGCCGCCAACGAGCCGACCACCAGTAGTCCGGCA AGCACCGCTGGGGCGTTCCTGCGCGGCCCTGAACAGTTCGGCACCGACACACCCCGTCGCCTGATCTCACAGCGGAATCC CGAACCATCCCGACACAATCCACATCGCTATTCTCAAGGAGAAGCATCCATGTCTATCTGTGATCCGGCGCTGCGTAATG CGCTACGTACCCTGAAACTGTCCGGCATGCTCGACACCCTCGACGCCCGCCTGGCCCAAACCCGCAACGGCGACCTGGGG CATCTGGAATTCCTGCAAGCGTTGCGTGAAGACGAGATCGCCCGCCGCGAGTCCGCCGCCCTGACACGACGATTACGCCG CGCCAAGTTCGAAGCCCAAGCCACCTTCGAAGACTTCGACTTCACTGCCAACCCGAAACTGCCCGGTGCGATGTTGCGCG ATCTGGCCGCGCTGCGCTGGCTGGATGCCGGCGAATCGGTCATCCTCCACGGCCCGGTCGGCGTCGGAAAAACCCATGTA GCACAAGCACTTGTCCACGCCGTGGCCCGCCGCGGCGGCGACGTGCGCTTCGCCAAAACCTCCCGCATGCTCTCCGACCT CGCCGGCGGGCACGCCGACCGATCCTGGGGCCAACGCATCCGCGAATACACCAAGCCGCTCGTGCTCATTCTGGACGACT TCGCGATGCGTGAGCACACCGCCATGCACGCTGATGACCTCTACGAGCTCATCAGCGACCGCGCCATCACTGGCAAACCG CTGATCTTGACCAGCAACCGCGCACCGAATAACTGGTACGGCCTGTTCCCCAACCCCGTCGTCGCCGAATCACTCCTGGA TCGGCTCATCAACACCAGCCACCAAATCCTCATGGACGGACCCAGCTACCGACCCCGCAAGAGACCCGGCCGCACCACCA GCTAG
Upstream 100 bases:
>100_bases GGGTGGTTTCCTGAATGATCCGGCGGCGCGGGCGTCGACGTGGCCGCTGATCGCGCCGCATCATGATCGGATCAAGGACT GGCTGGATGCCGATGTCACG
Downstream 100 bases:
>100_bases ACAACGCCCACACGGGCCGCTAAGACCTACCACTGAGGCACACACCTGGGGAATTACGTGACGCCAACCCCTGGGGAATT ACGTGGCGGTCGACAGGGGC
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 694; Mature: 693
Protein sequence:
>694_residues MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWFDPATARRVAVWAFVMVLA FSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKD KPRVERPMTYVRDSFWKGREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSHYPPEKIAFHMRTPTWCRHTA ELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRLEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPA STAGAFLRGPEQFGTDTPRRLISQRNPEPSRHNPHRYSQGEASMSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLG HLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHV AQALVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKP LILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS
Sequences:
>Translated_694_residues MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWFDPATARRVAVWAFVMVLA FSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKD KPRVERPMTYVRDSFWKGREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSHYPPEKIAFHMRTPTWCRHTA ELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRLEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPA STAGAFLRGPEQFGTDTPRRLISQRNPEPSRHNPHRYSQGEASMSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLG HLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHV AQALVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKP LILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS >Mature_693_residues ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGMWFDPATARRVAVWAFVMVLAF SRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDNLRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDK PRVERPMTYVRDSFWKGREFDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIGT VGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSHYPPEKIAFHMRTPTWCRHTAE LVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDRLEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPAS TAGAFLRGPEQFGTDTPRRLISQRNPEPSRHNPHRYSQGEASMSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLGH LEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRWLDAGESVILHGPVGVGKTHVA QALVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRIREYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKPL ILTSNRAPNNWYGLFPNPVVAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS
Specific function: Unknown
COG id: COG4584
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 77416; Mature: 77285
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHCCCCC FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCEEECCCCCC TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCC YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR CCHHHEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGAFLRGPEQFGTDTPRR HHHHHHHHHHCCCCCHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCHHH LISQRNPEPSRHNPHRYSQGEASMSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLG HHHCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH HLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHH LDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRI HCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCHHHHHHH REYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPV HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHH VAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure ATIAQRLRDDHGVAASESSVRRWIATHFAEEVARERVTVPRGPVDAGSEAQIDYGRLGM CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC WFDPATARRVAVWAFVMVLAFSRHLFVRPVIRMDQTAWCACHVAAFEFFDGVPARLVCDN EECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHH LRTGVDKPDLYDPQINRSYAELASHYATLVDPARARKPKDKPRVERPMTYVRDSFWKGRE HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHCCCCC FDSLAQMQQAAVTWSTEVAGLRYLRALEGAQPLRMFEAVEQQALIALPPRAFELTSWSIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEECCCCCEEECCCCCC TVGVDTHLKVGKALYSVPWRLIGQRLHARTAGDVVQIFAGNDVVATHVRRPSGRSTDFSH EECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCC YPPEKIAFHMRTPTWCRHTAELVGPACQQVIAEFMRDNAIHHLRSAQGVLGLRDKHGCDR CCHHHEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH LEAACARAIEVGDPSYRTIKGILVAGTEHAANEPTTSSPASTAGAFLRGPEQFGTDTPRR HHHHHHHHHHCCCCCHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCHHHCCCCHHH LISQRNPEPSRHNPHRYSQGEASMSICDPALRNALRTLKLSGMLDTLDARLAQTRNGDLG HHHCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH HLEFLQALREDEIARRESAALTRRLRRAKFEAQATFEDFDFTANPKLPGAMLRDLAALRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCHHHHHHHHHHHH LDAGESVILHGPVGVGKTHVAQALVHAVARRGGDVRFAKTSRMLSDLAGGHADRSWGQRI HCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCCHHHHHHH REYTKPLVLILDDFAMREHTAMHADDLYELISDRAITGKPLILTSNRAPNNWYGLFPNPV HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCHH VAESLLDRLINTSHQILMDGPSYRPRKRPGRTTS HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230 [H]