Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

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The map label for this gene is 148824594

Identifier: 148824594

GI number: 148824594

Start: 3811903

End: 3812580

Strand: Direct

Name: 148824594

Synonym: TBFG_13421

Alternate gene names: NA

Gene position: 3811903-3812580 (Clockwise)

Preceding gene: 148824593

Following gene: 148824595

Centisome position: 86.16

GC content: 66.22

Gene sequence:

>678_bases
GTGGTACGTAACGCCCAACGTGCGGTGCGCCGCGCCAGTGGGCGGCGCAAAGCCTGGCTACGCCAGGCCATCAACCATCT
CGAGAAGCTGATCGGACGCACCGAGCGGGTGGTGGACCAGGCCCGTAGCCGGCTGGCCGGGGTAATGCCCGACTCAAGCA
GCCGCCTGGTCAGTCTCCACGATGCCGACGCTCGCCCGATCCGCAAGGGACGATTGGGCAAGCCGGTCGAGTTCGGCTAC
AAGGCCCAGGTCGTCGACAACGCCGACGGTGTCATCCTGGACCACAGCGTCGAGCTCGGAAACCCCGCAGATGCACCGCA
ATTGGCACCCGCCATCGAACGGATCAGCCGCCGCACCGGACGCCCACCACGGGCAGTGACCGCTGATCGGGGCTGCGGAG
ACGCATCGGTCGAAGATGATCTCCACCAGCTCGGGGTGCGCAACGTGGCCATCCCACGCAAGAGCAAACCCAGCGCCACC
CGCCGCGCATTCGAACACCGACGGGCATTCCGCGACAAGATCAAATGGCGAACCGGATCCGAAGGACGCATCAACCACCT
CAAGCGCAGCTACGGCTGGAACCGCACCGAACTCACCGGCATCACCGGCGCCCGAACCTGGTGCGGACACGGCGTCTTCG
CCCACAACCTCGTCAAGATCAGCACCCTGGCAGCGTGA

Upstream 100 bases:

>100_bases
ACGCGGCGCGCAGCAACGCGATCAGGCGCAGGCCTTCGTGCGCCGGATCACCGGGGAGCTAGCCGGGATCGCCGAGCAGG
CGCTGACCGAGGCTGCCGCG

Downstream 100 bases:

>100_bases
CAGACACCCGCGCCCACCCCGACCACGCCACGCAGGTCGCCCAGCCCGCCGCCGTCAATGCAACCGCGACTTTTTCAGGT
CTTAGTAATTAGTGGCCGCC

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase And Inactivated Derivatives; Methyl-Accepting Chemotaxis Sensory Transducer

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLHDADARPIRKGRLGKPVEFGY
KAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSAT
RRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA

Sequences:

>Translated_225_residues
MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLHDADARPIRKGRLGKPVEFGY
KAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSAT
RRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA
>Mature_225_residues
MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLHDADARPIRKGRLGKPVEFGY
KAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTGRPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSAT
RRAFEHRRAFRDKIKWRTGSEGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA

Specific function: Unknown

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25022; Mature: 25022

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLH
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
DADARPIRKGRLGKPVEFGYKAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTG
CCCCCCHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
RPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSATRRAFEHRRAFRDKIKWRTGS
CCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
EGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA
CCHHHHHHHHCCCCCCEECCCCCCHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRNAQRAVRRASGRRKAWLRQAINHLEKLIGRTERVVDQARSRLAGVMPDSSSRLVSLH
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
DADARPIRKGRLGKPVEFGYKAQVVDNADGVILDHSVELGNPADAPQLAPAIERISRRTG
CCCCCCHHCCCCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
RPPRAVTADRGCGDASVEDDLHQLGVRNVAIPRKSKPSATRRAFEHRRAFRDKIKWRTGS
CCCCCEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
EGRINHLKRSYGWNRTELTGITGARTWCGHGVFAHNLVKISTLAA
CCHHHHHHHHCCCCCCEECCCCCCHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA