| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824574
Identifier: 148824574
GI number: 148824574
Start: 3787337
End: 3789967
Strand: Reverse
Name: 148824574
Synonym: TBFG_13401
Alternate gene names: NA
Gene position: 3789967-3787337 (Counterclockwise)
Preceding gene: 148824578
Following gene: 148824573
Centisome position: 85.66
GC content: 68.34
Gene sequence:
>2631_bases GTGACCATGTTCGCCCGCCCGACCATCCCGGTCGCGGCGGCCGCTTCTGATATTTCCGCCCCGGCTCAACCGGCCCGCGG CAAACCTCAGCAACGCCCGCCGTCCTGGTCGCCGCGCAACTGGCCGGTCCGATGGAAAGTGTTCACGATCGCGCTTCTGC CGCTGGTAGTGGCGATGGTGTTAGCAGGATTGCGGGTCGAGGCTGCGATGGCCAGCACCAGCGGCCTGCGGCTGGTCGCC GCGCGCGCCGAAATGATACCCGCGATCACGAAATACATGTCGGCGCTGGACGTCGCCGTGCTGGCCAGCTCGACCGGACA CGATGTGGAGGGGGCGCAGAAAAACTTCACCGCCCGCAAGTACGAGCTGCAGACGCGACTGGCCGACACCGACGTCATCG CAGACGTGCGGTCGGGAGTGAACACGCTGCTCAACGGCGGTCAGGCGCTGCTGGATAAGGTGCTGGCCGACAGCATCGGC TTGCGGGATCGGGTCACCGCCTACGCGCCGCTGCTGTTGACGGCCCAGAACGTGATTGACGCGTCGGTGCGGGTTGACAG CGAGCAAATCCGAACCCAGGTGCAGGGTTTGAGCCGAGCCGTTGGCGCCCGCGGGCAGATGACGATGCAGGAGATCCTGG TGACTCGCGGCGCCGACCTTGCCGAGCCGCAACTGCGCAGCGCGATGGTTACCCTGGCCGGCACCGAACCCTCGACGCTG TTCGGGATGAGCGCGGCGCTCGGTGCAGGCTCGCCGGACACCAAGAACCTGCAGCAGCAAATGGTGACCAGGATGACGAT CATGTCCGATCCGGCCGTTGCACTGGTCAACAACCCAGAGCTGCTGCACTCGATACAGATCACCCGCGACATTGCCGAGC AGGTGATCACCGACACCACCGAGGCGGTGACGAAGTCGGTGCAAAGCCAGGCCACCGACCGGCGGGATGCCGCGATTCGC GACGCCGTGCTGGTGTTGGCCGCCATCGCGACCGCGATCGTCGTCGTGTTGGTGGTGGCGCGCACGCTGGTCGGGCCGAT GCGGGTACTGCGTGATGGGGCGCTCAAGGTTGCTCATACCGATCTCGACGGCGAGATCGCGGCGGTCCGCGCCGGCGACG AGCCGATCCCCGAGCCACTGGCGGTGTACACCACCGAGGAAATCGGTCAGGTCGCGCATGCGGTCGACGAGCTGCACACC CGGGCCCTGTTGCTGGCCGGCGAGGAAACGCGGTTGCGACTGCTGGTCAACGAGATGTTTGAGACCATGTCGCGGCGTAG CCGTTCCCTGGTCGACCAGCAGCTGTCGGTCATCGACCAACTGGAGCGCAACGAGGAGGATCCCGCCCGACTCGACAGCC TTTTCCGGCTCGATCACCTGGCCGCCCGGCTGCGCCGCAACAGCGCCAACCTGCTGGTGCTGGCCGGTGCGCAGATTACC CGTGACCACCGCGAGCCGGTGCCGCTGTCAACCGTGATCAGCGCCGCCGTGTCAGAGGTCGAGGACTATCGCCGCGTCGA CATCGCGAGGGTACCCGACTGTGCGGTAGTCGGCGCAGCGGCTGGTGGCGTCATTCATCTGCTTGCCGAGCTGATCGACA ACGCGTTGCGCTACTCGTCACCGACCACACCCGTTCGGGTTGCCGCCGCAATCGGCAGCGAAGGCAGTGTTCTGCTGCGA ATCTCGGATTCCGGCCTGGGCATGACCGATGCCGATCGGCGGATGGCCAATATGCGGCTGCGGGCCGGCGGTGAGGTCAC CCCGGATAGTGCCCGGCACATGGGTCTGTTCGTAGTCGGCCGGCTGGCCGGTCGGCACGGCATCCGAGTCGGGCTGCGCG GTCCGGTGACCGGTGAACAGGGCACCGGCACCACCGCCGAGGTCTACCTGCCGCTAGCCGTGCTCGAGGGGACGGCCCCA GCGCAGCCGCCAAAGCCGCGGGTATTTGCGATCAAGCCGCCGTGTCCTGAACCCGCGGCGGCCGATCCGACGGACGTTCC CGCCGCCATCGGGCCGCTACCACCGGTCACGTTGCTCCCGCGCCGTACCCCGGGGTCCAGTGGCATCGCCGACGTCCCGG CCCAGCCGATGCAGCAGCGGCGGCGCGAGCTGAAAACACCCTGGTGGGAGGATAGGTTTCAACAGGAGCCCAAACAACCG CCCGCACCAGAACCGCGACCGGCGCCGCCGCCCGCCAAACCCGCGCCACCGGCGGGCCCGGTTGATGACGACGTCATCTA CCGGCGGATGCTCTCCGAGATGGTGGGTGACCCGCACGAGCTGGCCCACAGCCCCGATCTGGACTGGAAGTCGGTGTGGG ACCACGGCTGGTCGGCGGCCGCCGAGGCCGCGGACAAGCCCGTGCAGTCCCGCACGGACTACGGCCTGCCGGTGCGCGAA CCCGGGGCCCGGTTAGTGCCGGGGGCGGCGGTGCCTGAGGGACCCGATCGGGAGCATCCGGGTGCAGCGCTAGCATCCAA CGGCGGACTTCATCCCGGCCGAGCGCCGCGGCACGCGGCTGCGGTACGCGACCCCGACGCGGTTCGTGCCTCCATCAGCA GCCATTTCGGCGGCGTGCGCACCGGGCGGTCGCATGCCCGCGAGAGCAGTCAGGGACCCAATCAGCAATGA
Upstream 100 bases:
>100_bases GCTGGGGCGGACGGCATCAAGGCATGAGCAGGAAGTCTATGAGTCTCTCCGTTTTTCGAGCGCTGCATAAGGGTGCGGCC GGTGGCACGGCCGCGGCCAC
Downstream 100 bases:
>100_bases AAGCCCGCTTGCCGGACAGCCCGCTTGACTGGCTGGTGTCGAAGTTCGCCCGCGAGGTTCCCGGGGTGGCCCATGCATTG CTGGTGTCGGTCGACGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Sensor-Like Histidine Kinase; Sensor With HAMP Domain; Periplasmic Sensor Signal Transduction Histidine Kinase; Large Secreted Protein; Two Component Sensor Kinase; Sensor Histidine Kinase; Sensor Protein; Two-Component System Sensor Kinase; Two-Component System Histidine Kinase; Membrane C; ATPase Domain-Containing Protein; Signal Transduction Histidine Kinase; HAMP Domain Protein; Signal Transduction Histidine Kinase-Like Protein; Histidine Kinase HAMP Region Domain-Containing Protein; Sensor Signal Transduction Histidine Kinase; Nitrate And Nitrite Sensing Domain-Containing Protein; Regultory Protein; Sensor Kinase; LOW QUALITY PROTEIN Large Secreted Protein; Signal Transduction Histidine Kinase Membrane Protein; Nitrate/Nitrite-Sensing Histidine Kinase; HAMP Domain-Containing Histidine Kinase; ATPase; HAMP Domain-Containing Protein; Histidine Kinase HAMP Region Domain Protein; Sensor With HAMP Domain-Containing Protein; LOW QUALITY PROTEIN HAMP Domain-Containing Protein; Nitrite/Nitrate Sensor Kinase
Number of amino acids: Translated: 876; Mature: 875
Protein sequence:
>876_residues MTMFARPTIPVAAAASDISAPAQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAMVLAGLRVEAAMASTSGLRLVA ARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTARKYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIG LRDRVTAYAPLLLTAQNVIDASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPSTL FGMSAALGAGSPDTKNLQQQMVTRMTIMSDPAVALVNNPELLHSIQITRDIAEQVITDTTEAVTKSVQSQATDRRDAAIR DAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAHTDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHT RALLLAGEETRLRLLVNEMFETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQIT RDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYSSPTTPVRVAAAIGSEGSVLLR ISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVVGRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVLEGTAP AQPPKPRVFAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPAQPMQQRRRELKTPWWEDRFQQEPKQP PAPEPRPAPPPAKPAPPAGPVDDDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVRE PGARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTGRSHARESSQGPNQQ
Sequences:
>Translated_876_residues MTMFARPTIPVAAAASDISAPAQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAMVLAGLRVEAAMASTSGLRLVA ARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTARKYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIG LRDRVTAYAPLLLTAQNVIDASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPSTL FGMSAALGAGSPDTKNLQQQMVTRMTIMSDPAVALVNNPELLHSIQITRDIAEQVITDTTEAVTKSVQSQATDRRDAAIR DAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAHTDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHT RALLLAGEETRLRLLVNEMFETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQIT RDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYSSPTTPVRVAAAIGSEGSVLLR ISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVVGRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVLEGTAP AQPPKPRVFAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPAQPMQQRRRELKTPWWEDRFQQEPKQP PAPEPRPAPPPAKPAPPAGPVDDDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVRE PGARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTGRSHARESSQGPNQQ >Mature_875_residues TMFARPTIPVAAAASDISAPAQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAMVLAGLRVEAAMASTSGLRLVAA RAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTARKYELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGL RDRVTAYAPLLLTAQNVIDASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPSTLF GMSAALGAGSPDTKNLQQQMVTRMTIMSDPAVALVNNPELLHSIQITRDIAEQVITDTTEAVTKSVQSQATDRRDAAIRD AVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAHTDLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTR ALLLAGEETRLRLLVNEMFETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQITR DHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYSSPTTPVRVAAAIGSEGSVLLRI SDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVVGRLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVLEGTAPA QPPKPRVFAIKPPCPEPAAADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPAQPMQQRRRELKTPWWEDRFQQEPKQPP APEPRPAPPPAKPAPPAGPVDDDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAAAEAADKPVQSRTDYGLPVREP GARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAAAVRDPDAVRASISSHFGGVRTGRSHARESSQGPNQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93473; Mature: 93342
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMFARPTIPVAAAASDISAPAQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAMV CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH LAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTARK HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHH YELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVID HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPSTL HHHEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHEEEEECCCCCHH FGMSAALGAGSPDTKNLQQQMVTRMTIMSDPAVALVNNPELLHSIQITRDIAEQVITDTT HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH EAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE DLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEMF CCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH ETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQIT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHH RDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYSS HCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHEEHHHCCHHHHHHHHHHHHHHHCCC PTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVVG CCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVLEGTAPAQPPKPRVFAIKPPCPEPAA HHHCCCCEEEECCCCCCCCCCCCCEEEEEEEEHEECCCCCCCCCCCCEEEECCCCCCCCC ADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPAQPMQQRRRELKTPWWEDRFQQEPKQP CCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCC PAPEPRPAPPPAKPAPPAGPVDDDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCHHHH AEAADKPVQSRTDYGLPVREPGARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHH AVRDPDAVRASISSHFGGVRTGRSHARESSQGPNQQ HCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure TMFARPTIPVAAAASDISAPAQPARGKPQQRPPSWSPRNWPVRWKVFTIALLPLVVAMV CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHH LAGLRVEAAMASTSGLRLVAARAEMIPAITKYMSALDVAVLASSTGHDVEGAQKNFTARK HHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHH YELQTRLADTDVIADVRSGVNTLLNGGQALLDKVLADSIGLRDRVTAYAPLLLTAQNVID HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH ASVRVDSEQIRTQVQGLSRAVGARGQMTMQEILVTRGADLAEPQLRSAMVTLAGTEPSTL HHHEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHEEEEECCCCCHH FGMSAALGAGSPDTKNLQQQMVTRMTIMSDPAVALVNNPELLHSIQITRDIAEQVITDTT HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH EAVTKSVQSQATDRRDAAIRDAVLVLAAIATAIVVVLVVARTLVGPMRVLRDGALKVAHT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE DLDGEIAAVRAGDEPIPEPLAVYTTEEIGQVAHAVDELHTRALLLAGEETRLRLLVNEMF CCCCCEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHH ETMSRRSRSLVDQQLSVIDQLERNEEDPARLDSLFRLDHLAARLRRNSANLLVLAGAQIT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHH RDHREPVPLSTVISAAVSEVEDYRRVDIARVPDCAVVGAAAGGVIHLLAELIDNALRYSS HCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCHHEEHHHCCHHHHHHHHHHHHHHHCCC PTTPVRVAAAIGSEGSVLLRISDSGLGMTDADRRMANMRLRAGGEVTPDSARHMGLFVVG CCCCEEEEEEECCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH RLAGRHGIRVGLRGPVTGEQGTGTTAEVYLPLAVLEGTAPAQPPKPRVFAIKPPCPEPAA HHHCCCCEEEECCCCCCCCCCCCCEEEEEEEEHEECCCCCCCCCCCCEEEECCCCCCCCC ADPTDVPAAIGPLPPVTLLPRRTPGSSGIADVPAQPMQQRRRELKTPWWEDRFQQEPKQP CCCCCCCHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCC PAPEPRPAPPPAKPAPPAGPVDDDVIYRRMLSEMVGDPHELAHSPDLDWKSVWDHGWSAA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHCCHHHH AEAADKPVQSRTDYGLPVREPGARLVPGAAVPEGPDREHPGAALASNGGLHPGRAPRHAA HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHH AVRDPDAVRASISSHFGGVRTGRSHARESSQGPNQQ HCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA