| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is mdeA [H]
Identifier: 148824546
GI number: 148824546
Start: 3738454
End: 3739803
Strand: Direct
Name: mdeA [H]
Synonym: TBFG_13373
Alternate gene names: 148824546
Gene position: 3738454-3739803 (Clockwise)
Preceding gene: 148824543
Following gene: 148824547
Centisome position: 84.5
GC content: 66.81
Gene sequence:
>1350_bases ATGAGCGCCGACAGCAATAGCACCGACGCCGATCCGACCGCGCATTGGTCGTTCGAAACCAAACAGATACACGCTGGTCA GCACCCTGATCCGACCACCAACGCCCGGGCTCTGCCGATCTATGCGACCACGTCGTACACCTTCGACGACACCGCGCACG CCGCCGCCCTGTTCGGACTGGAAATTCCGGGCAATATCTACACCCGGATCGGCAACCCCACCACCGACGTCGTCGAGCAG CGCATCGCCGCGCTCGAGGGCGGTGTGGCCGCGCTGTTCCTGTCGTCGGGGCAGGCCGCGGAGACGTTCGCCATCTTGAA CCTGGCCGGCGCGGGCGATCACATCGTGTCCAGCCCGCGCCTGTACGGCGGCACCTACAACCTGTTCCACTATTCGCTGG CCAAGCTCGGCATCGAGGTCAGCTTCGTCGACGATCCGGACGATCTGGACACCTGGCAGGCGGCGGTACGGCCCAACACC AAGGCGTTCTTCGCCGAGACCATCTCCAACCCGCAGATCGACCTGCTGGACACCCCGGCGGTTTCCGAGGTCGCCCATCG CAACGGGGTGCCGTTGATCGTCGACAACACCATCGCCACGCCATACCTGATCCAACCGTTGGCCCAGGGCGCCGACATCG TCGTGCATTCGGCCACCAAGTACCTGGGCGGGCACGGTGCCGCCATCGCGGGTGTGATCGTCGACGGCGGCAACTTCGAT TGGACCCAGGGCCGCTTCCCCGGCTTCACCACCCCCGACCCCAGCTACCACGGCGTGGTGTTCGCCGAGCTGGGTCCACC GGCGTTTGCGCTCAAAGCTCGAGTGCAGCTGCTCCGTGACTACGGCTCGGCGGCTTCGCCGTTCAACGCGTTCTTGGTGG CGCAGGGTCTGGAAACGCTGAGCCTGCGGATCGAGCGGCACGTCGCCAACGCGCAGCGCGTCGCCGAGTTCCTGGCCGCC CGCGACGACGTGCTTTCGGTCAACTATGCGGGGCTGCCCTCCTCGCCCTGGCATGAGCGGGCCAAGAGGCTGGCGCCCAA GGGAACCGGGGCCGTGCTGTCCTTCGAGTTGGCCGGCGGCATCGAGGCCGGCAAGGCATTCGTGAACGCGTTGAAGCTGC ACAGCCACGTCGCCAACATCGGTGACGTGCGCTCGCTGGTGATCCACCCGGCATCGACCACTCATGCCCAGCTGAGCCCG GCCGAGCAGCTGGCGACCGGGGTCAGCCCGGGCCTGGTGCGTTTGGCTGTGGGCATCGAAGGTATCGACGATATCCTGGC CGACCTGGAGCTTGGCTTTGCCGCGGCCCGCAGATTCAGCGCCGACCCGCAGTCCGTGGCGGCGTTCTGA
Upstream 100 bases:
>100_bases GTGGGGTGCCCCGGGTGATGACCAGGTTGAGTAGCCATCGCCGGCTGCGCGGCAAGCGCGGGTCCGCCATGACGGGCCCC TGACCAGACGGGGAAAGCTC
Downstream 100 bases:
>100_bases GGAATTCTGACATGACGATCTCCGATGTACCCACCCAGACGCTGCCCGCCGAAGGCGAAATCGGCCTGATAGACGTCGGC TCGCTGCAACTGGAAAGCGG
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSADSNSTDADPTAHWSFETKQIHAGQHPDPTTNARALPIYATTSYTFDDTAHAAALFGLEIPGNIYTRIGNPTTDVVEQ RIAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYSLAKLGIEVSFVDDPDDLDTWQAAVRPNT KAFFAETISNPQIDLLDTPAVSEVAHRNGVPLIVDNTIATPYLIQPLAQGADIVVHSATKYLGGHGAAIAGVIVDGGNFD WTQGRFPGFTTPDPSYHGVVFAELGPPAFALKARVQLLRDYGSAASPFNAFLVAQGLETLSLRIERHVANAQRVAEFLAA RDDVLSVNYAGLPSSPWHERAKRLAPKGTGAVLSFELAGGIEAGKAFVNALKLHSHVANIGDVRSLVIHPASTTHAQLSP AEQLATGVSPGLVRLAVGIEGIDDILADLELGFAAARRFSADPQSVAAF
Sequences:
>Translated_449_residues MSADSNSTDADPTAHWSFETKQIHAGQHPDPTTNARALPIYATTSYTFDDTAHAAALFGLEIPGNIYTRIGNPTTDVVEQ RIAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYSLAKLGIEVSFVDDPDDLDTWQAAVRPNT KAFFAETISNPQIDLLDTPAVSEVAHRNGVPLIVDNTIATPYLIQPLAQGADIVVHSATKYLGGHGAAIAGVIVDGGNFD WTQGRFPGFTTPDPSYHGVVFAELGPPAFALKARVQLLRDYGSAASPFNAFLVAQGLETLSLRIERHVANAQRVAEFLAA RDDVLSVNYAGLPSSPWHERAKRLAPKGTGAVLSFELAGGIEAGKAFVNALKLHSHVANIGDVRSLVIHPASTTHAQLSP AEQLATGVSPGLVRLAVGIEGIDDILADLELGFAAARRFSADPQSVAAF >Mature_448_residues SADSNSTDADPTAHWSFETKQIHAGQHPDPTTNARALPIYATTSYTFDDTAHAAALFGLEIPGNIYTRIGNPTTDVVEQR IAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYSLAKLGIEVSFVDDPDDLDTWQAAVRPNTK AFFAETISNPQIDLLDTPAVSEVAHRNGVPLIVDNTIATPYLIQPLAQGADIVVHSATKYLGGHGAAIAGVIVDGGNFDW TQGRFPGFTTPDPSYHGVVFAELGPPAFALKARVQLLRDYGSAASPFNAFLVAQGLETLSLRIERHVANAQRVAEFLAAR DDVLSVNYAGLPSSPWHERAKRLAPKGTGAVLSFELAGGIEAGKAFVNALKLHSHVANIGDVRSLVIHPASTTHAQLSPA EQLATGVSPGLVRLAVGIEGIDDILADLELGFAAARRFSADPQSVAAF
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=403, Percent_Identity=34.4913151364764, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI299473759, Length=403, Percent_Identity=30.7692307692308, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI25453487, Length=402, Percent_Identity=31.0945273631841, Blast_Score=162, Evalue=7e-40, Organism=Escherichia coli, GI1790375, Length=421, Percent_Identity=34.4418052256532, Blast_Score=207, Evalue=2e-54, Organism=Escherichia coli, GI1789383, Length=424, Percent_Identity=27.8301886792453, Blast_Score=134, Evalue=1e-32, Organism=Caenorhabditis elegans, GI71980708, Length=413, Percent_Identity=34.3825665859564, Blast_Score=231, Evalue=8e-61, Organism=Caenorhabditis elegans, GI17538055, Length=407, Percent_Identity=35.3808353808354, Blast_Score=222, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17560056, Length=407, Percent_Identity=35.8722358722359, Blast_Score=218, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6323333, Length=433, Percent_Identity=48.4988452655889, Blast_Score=348, Evalue=9e-97, Organism=Saccharomyces cerevisiae, GI6319307, Length=427, Percent_Identity=34.4262295081967, Blast_Score=203, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6321170, Length=339, Percent_Identity=28.023598820059, Blast_Score=116, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6321254, Length=438, Percent_Identity=26.9406392694064, Blast_Score=115, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6321904, Length=420, Percent_Identity=26.1904761904762, Blast_Score=86, Evalue=2e-17, Organism=Drosophila melanogaster, GI19922554, Length=424, Percent_Identity=34.1981132075472, Blast_Score=222, Evalue=3e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 47371; Mature: 47240
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADSNSTDADPTAHWSFETKQIHAGQHPDPTTNARALPIYATTSYTFDDTAHAAALFGL CCCCCCCCCCCCCEEECEECCEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHEEEEEEE EIPGNIYTRIGNPTTDVVEQRIAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPR ECCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCE LYGGTYNLFHYSLAKLGIEVSFVDDPDDLDTWQAAVRPNTKAFFAETISNPQIDLLDTPA EECCCHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCH VSEVAHRNGVPLIVDNTIATPYLIQPLAQGADIVVHSATKYLGGHGAAIAGVIVDGGNFD HHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCEEEECHHHHHCCCCCEEEEEEEECCCCC WTQGRFPGFTTPDPSYHGVVFAELGPPAFALKARVQLLRDYGSAASPFNAFLVAQGLETL CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHH SLRIERHVANAQRVAEFLAARDDVLSVNYAGLPSSPWHERAKRLAPKGTGAVLSFELAGG HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCC IEAGKAFVNALKLHSHVANIGDVRSLVIHPASTTHAQLSPAEQLATGVSPGLVRLAVGIE CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCEEEEECCC GIDDILADLELGFAAARRFSADPQSVAAF CHHHHHHHHHHHHHHHHHCCCCHHHHCCC >Mature Secondary Structure SADSNSTDADPTAHWSFETKQIHAGQHPDPTTNARALPIYATTSYTFDDTAHAAALFGL CCCCCCCCCCCCEEECEECCEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHEEEEEEE EIPGNIYTRIGNPTTDVVEQRIAALEGGVAALFLSSGQAAETFAILNLAGAGDHIVSSPR ECCCCEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCE LYGGTYNLFHYSLAKLGIEVSFVDDPDDLDTWQAAVRPNTKAFFAETISNPQIDLLDTPA EECCCHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCH VSEVAHRNGVPLIVDNTIATPYLIQPLAQGADIVVHSATKYLGGHGAAIAGVIVDGGNFD HHHHHHCCCCCEEEECCCCCHHHHHHHHCCCCEEEECHHHHHCCCCCEEEEEEEECCCCC WTQGRFPGFTTPDPSYHGVVFAELGPPAFALKARVQLLRDYGSAASPFNAFLVAQGLETL CCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHH SLRIERHVANAQRVAEFLAARDDVLSVNYAGLPSSPWHERAKRLAPKGTGAVLSFELAGG HHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCEEEEEECCC IEAGKAFVNALKLHSHVANIGDVRSLVIHPASTTHAQLSPAEQLATGVSPGLVRLAVGIE CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHCCCCCCCEEEEECCC GIDDILADLELGFAAARRFSADPQSVAAF CHHHHHHHHHHHHHHHHHCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]