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The map label for this gene is yhjD [H]

Identifier: 148824541

GI number: 148824541

Start: 3734058

End: 3734927

Strand: Reverse

Name: yhjD [H]

Synonym: TBFG_13368

Alternate gene names: 148824541

Gene position: 3734927-3734058 (Counterclockwise)

Preceding gene: 148824542

Following gene: 148824539

Centisome position: 84.42

GC content: 65.06

Gene sequence:

>870_bases
ATGGGCGACCTCGCCGAGCCAGGGGTGCTTGACCGGCTGCGGGCCCGGTTCGGGTGGTTGGACCATGTCGTGCGTGCGTT
CACGCGCTTTAACGATCGCAACGGCAGTCTTTTTGCGGCCGGACTCACCTACTACACGATCTTTGCGATATTTCCTTTGC
TGATGGTCGGTTTCGGGGTGGGTGGATTCGCGTTGTCGCGTCGTCCGGAGCTGCTGACCACGCTCGAGGAGCGCATCCGC
ACCTCGGTCTCCGGTGCGGTGGGACAGCAGCTGGTCGACCTGATGAATTCGGCGATCGATGCACGCGCGTCGGTCGGGGT
GATCGGTCTGGCGACCGCGGCCTGGGTGGGCCTGGGCTGGATGTGGCACCTGCGGGAAGCGTTGAGCCAGATGTGGGCAC
ATCCAGTCGCTCCGGCGGGCTACTTGCGCACCAAACTGTCGGATCTAGCGGCCATGGTGGGGACGTTCGTGGTGATCGTG
GCCACCATCGCGCTCACCGTGCTCGGCCATGCCAGGCCGATGGCTGCGGTACTGAGATGGCTTGAAATACCCCAGTTTTC
AGTGTTCGACGAGATCTTTCGGGGCATCTCGGTGCTGGTATCGGTGCTGGTGTCGTGGGTGCTGTTCACCTGGATGATTG
GCCGGCTGCCGCGGGAGCCGGTCGGTTTGGTCACCGCGGCGCGGGCCGGGTTGATGGCGGCGGTCGGCTTCGAGCTGTTC
AAGCAGGTGGGGGCGATCTACCTGCAGATAGTGTTGCGCAGCCCGGCGGGCGCGGTGTTCGGGCCGGTGCTGGGGTTGAT
GGTGTTCGCGTTCGTCACCGCGTGGCTGATCCTGTTCGCCACCGCGTGGGCGGCGACGGCTTCGGCGTAA

Upstream 100 bases:

>100_bases
CCGCCGGGGCGCAGCGCGCCCACGATGTGGCCAGCAAAACGGTTCAGCGAGTCTACGATCGGCTCGGGTTCCTTCTATAA
CGGGGGTAGGGCAGTCGATC

Downstream 100 bases:

>100_bases
AACCCGTGGGCCAGCCCGCGTACCCAGCGACCTCTAGGCGTGAATGTCGCTGACCTCGATGGCGGTGGGCTCATCGAGGT
CGCTTTCCAGGATCCAACAC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MGDLAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPELLTTLEERIR
TSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIV
ATIALTVLGHARPMAAVLRWLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF
KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA

Sequences:

>Translated_289_residues
MGDLAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPELLTTLEERIR
TSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIV
ATIALTVLGHARPMAAVLRWLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF
KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA
>Mature_288_residues
GDLAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGVGGFALSRRPELLTTLEERIRT
SVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGWMWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVA
TIALTVLGHARPMAAVLRWLEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELFK
QVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789939, Length=274, Percent_Identity=35.036496350365, Blast_Score=163, Evalue=9e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005274
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 31279; Mature: 31148

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GDLAEPGVLDRLRARFGWLDHVVRAFTRFNDRNGSLFAAGLTYYTIFAIFPLLMVGFGV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
GGFALSRRPELLTTLEERIRTSVSGAVGQQLVDLMNSAIDARASVGVIGLATAAWVGLGW
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MWHLREALSQMWAHPVAPAGYLRTKLSDLAAMVGTFVVIVATIALTVLGHARPMAAVLRW
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LEIPQFSVFDEIFRGISVLVSVLVSWVLFTWMIGRLPREPVGLVTAARAGLMAAVGFELF
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KQVGAIYLQIVLRSPAGAVFGPVLGLMVFAFVTAWLILFATAWAATASA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]