| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824489
Identifier: 148824489
GI number: 148824489
Start: 3680666
End: 3681292
Strand: Reverse
Name: 148824489
Synonym: TBFG_13316
Alternate gene names: NA
Gene position: 3681292-3680666 (Counterclockwise)
Preceding gene: 148824490
Following gene: 148824488
Centisome position: 83.2
GC content: 65.07
Gene sequence:
>627_bases GTGCGGCTGGAAATCCCGGCATCGCGGGGTTTCACCGGCAGCTGCGAATGGGTATCACGGGTACACCATGATGAATCCCG ACCATGTTGCGTTAGATCCCCACTACCAGCAGGTCCGACCATGACCGACCAGCTCGAAGACCAGACCCAAGGCGGGAGTA CTGTCGATCGAAGCTTGCCGGGAGGGTGCATGGCCGACTCGGATTTACCCACCAAGGGGCGCCAACGCGGTGTCCGCGCC GTCGAGCTGAACGTTGCTGCCCGCCTGGAGAACCTGGCGCTGCTGCGCACCCTGGTCGGCGCCATCGGCACCTTCGAGGA CCTGGATTTCGACGCCGTGGCCGACCTGAGGTTGGCGGTGGACGAGGTGTGCACCCGGTTGATTCGCTCGGCCTTGCCGG ATGCCACCCTGCGCCTGGTGGTCGATCCGCGAAAAGACGAAGTTGTGGTGGAGGCTTCTGCTGCCTGCGACACCCACGAC GTGGTGGCACCGGGCAGCTTTAGCTGGCATGTCCTGACCGCGCTGGCCGACGACGTCCAGACCTTCCACGACGGTCGCCA GCCCGATGTAGCCGGCAGTGTCTTCGGCATCACGTTGACCGCCCGACGGGCGGCATCCAGCAGGTGA
Upstream 100 bases:
>100_bases GGCTAGCGTTCGAGCATCGGCGGATACGCAAGATTGCCGATCGCTGGTATACCGAACATCCCGAAGTCCGGCGGCAGCGG CTGGCCGGCTAGACATCCTA
Downstream 100 bases:
>100_bases CGGCGCGCGCTGCCGGCGGTTCTGCATCGCGAGCTAACGAATACGCCGACGTTCCGGAGATGTTTCGCGAGCTGGTTGGT TTGCCTGCCGGCTCACCGGA
Product: anti-sigma factor rsbW (sigma negative effector)
Products: NA
Alternate protein names: Anti-Sigma Factor RsbW; RsbW Protein
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MRLEIPASRGFTGSCEWVSRVHHDESRPCCVRSPLPAGPTMTDQLEDQTQGGSTVDRSLPGGCMADSDLPTKGRQRGVRA VELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHD VVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR
Sequences:
>Translated_208_residues MRLEIPASRGFTGSCEWVSRVHHDESRPCCVRSPLPAGPTMTDQLEDQTQGGSTVDRSLPGGCMADSDLPTKGRQRGVRA VELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHD VVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR >Mature_208_residues MRLEIPASRGFTGSCEWVSRVHHDESRPCCVRSPLPAGPTMTDQLEDQTQGGSTVDRSLPGGCMADSDLPTKGRQRGVRA VELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAVDEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHD VVAPGSFSWHVLTALADDVQTFHDGRQPDVAGSVFGITLTARRAASSR
Specific function: Unknown
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22333; Mature: 22333
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLEIPASRGFTGSCEWVSRVHHDESRPCCVRSPLPAGPTMTDQLEDQTQGGSTVDRSLP CEEECCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCHHHCCC GGCMADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAV CCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH DEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQ HHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH TFHDGRQPDVAGSVFGITLTARRAASSR HHHCCCCCCCCCCEEEEEEEEHHHCCCC >Mature Secondary Structure MRLEIPASRGFTGSCEWVSRVHHDESRPCCVRSPLPAGPTMTDQLEDQTQGGSTVDRSLP CEEECCCCCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCHHHCCC GGCMADSDLPTKGRQRGVRAVELNVAARLENLALLRTLVGAIGTFEDLDFDAVADLRLAV CCCCCCCCCCCCHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH DEVCTRLIRSALPDATLRLVVDPRKDEVVVEASAACDTHDVVAPGSFSWHVLTALADDVQ HHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHH TFHDGRQPDVAGSVFGITLTARRAASSR HHHCCCCCCCCCCEEEEEEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA