| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824417
Identifier: 148824417
GI number: 148824417
Start: 3606233
End: 3607198
Strand: Direct
Name: 148824417
Synonym: TBFG_13244
Alternate gene names: NA
Gene position: 3606233-3607198 (Clockwise)
Preceding gene: 148824415
Following gene: 148824418
Centisome position: 81.51
GC content: 65.94
Gene sequence:
>966_bases ATGCGTGCAGTGCTGATCGTCAACCCCACTGCGACCGCCACCACACCAGCCGGCCGCGACCTGCTGGCGCACGCCCTCGA AAGCCGCCTTCAGCTCACGGTTGAGCACACCAACCACCGCGGTCACGGGACCGAACTCGGACAGGCGGCGGTAGCCGACG GGGTGGACCTGGTCGTGGTGCATGGCGGCGATGGCACGGTAAGCGCCGTAGTCAACGGCATGCTGGGGCGCCCCGGCACG ACGCCGGTCCGACCGGTGCCAGCCGTTGCGGTTGTGCCCGGCGGCTCGGCCAACGTACTAGCTCGCGCGCTAGGGATTTC CGCGGACCCGATCGCTGCCACCAACCAACTCATCCAGCTGCTCGACGACTACGGCCGCCACCAGCAGTGGCGCCGCATCG GGCTGATCGACTGCGGTGAGCGGTGGGCGGTGTTCAACGCCGGCATGGGCGTCGACGCCGAGGTCGTGGCCGCGGTAGAG GCCGAACGCGACAAAGGCGGCAAGGTTACGGCGTGGCGCTATATTCGCGCTGCGGTGCGCGCGGTGCTCGCCTGCACTCG TCGCGAACCGGCTCTTACGCTGCAACTTCCCAACCGCGATCCAATTACCGGAGTGCACTTTGTGTTCGTGTCCAACTCCA GTCCGTGGACTTACGCAAACAACCGGCCGGTATGGACCAATCCCGACTGCAGGTTCGAGTCGGGGCTGGGAGTGTTCGCC ACCACCAGCATGAAGGTGGTCCCGACCCTGAGGGTGGTTCGGCAGATGTTCGCAAAACAGCCCAAGTTCGAGTTCAACCA CGTCATCAACAACGACGACGTCGCGTGTCTACGCGTCACCTCCATGGGGCCCCCGATCGCCAGCCAATTCGACGGGGACT ACCTCGGCGTGCGCGAGACGATGACGTTCCGAGCTGTTCCCGACGCCCTCGCCGTAGTTGCCCCGCCCGCAAGAAAGCGG ATCTGA
Upstream 100 bases:
>100_bases GGCCGACCCGGCCCGCATCGTCACACGGCCTAAGCCCATTGCCGTCCTCCTCAACGGGCCGACCCGGCCCGCATCGTCAC ACGGCCTAAGCTCGTGCGTC
Downstream 100 bases:
>100_bases GCTGCAGAAACAAAGATGTGATGGGTGTGCGACACAAACGTTGGGCGAAACTGGCAGCGTAGTCTGGCAGCGTAGTGTAG TACAACTGGGTAAGGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Diacylglycerol Kinase; Diacylglycerol Kinase Catalytic Subunit; Diacylglycerol Kinase Family Protein; Sphingosine/Diacylglycerol Kinase-Like; Sphingosine Kinase And DAGKc-Like Kinase; Lipid Kinase
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MRAVLIVNPTATATTPAGRDLLAHALESRLQLTVEHTNHRGHGTELGQAAVADGVDLVVVHGGDGTVSAVVNGMLGRPGT TPVRPVPAVAVVPGGSANVLARALGISADPIAATNQLIQLLDDYGRHQQWRRIGLIDCGERWAVFNAGMGVDAEVVAAVE AERDKGGKVTAWRYIRAAVRAVLACTRREPALTLQLPNRDPITGVHFVFVSNSSPWTYANNRPVWTNPDCRFESGLGVFA TTSMKVVPTLRVVRQMFAKQPKFEFNHVINNDDVACLRVTSMGPPIASQFDGDYLGVRETMTFRAVPDALAVVAPPARKR I
Sequences:
>Translated_321_residues MRAVLIVNPTATATTPAGRDLLAHALESRLQLTVEHTNHRGHGTELGQAAVADGVDLVVVHGGDGTVSAVVNGMLGRPGT TPVRPVPAVAVVPGGSANVLARALGISADPIAATNQLIQLLDDYGRHQQWRRIGLIDCGERWAVFNAGMGVDAEVVAAVE AERDKGGKVTAWRYIRAAVRAVLACTRREPALTLQLPNRDPITGVHFVFVSNSSPWTYANNRPVWTNPDCRFESGLGVFA TTSMKVVPTLRVVRQMFAKQPKFEFNHVINNDDVACLRVTSMGPPIASQFDGDYLGVRETMTFRAVPDALAVVAPPARKR I >Mature_321_residues MRAVLIVNPTATATTPAGRDLLAHALESRLQLTVEHTNHRGHGTELGQAAVADGVDLVVVHGGDGTVSAVVNGMLGRPGT TPVRPVPAVAVVPGGSANVLARALGISADPIAATNQLIQLLDDYGRHQQWRRIGLIDCGERWAVFNAGMGVDAEVVAAVE AERDKGGKVTAWRYIRAAVRAVLACTRREPALTLQLPNRDPITGVHFVFVSNSSPWTYANNRPVWTNPDCRFESGLGVFA TTSMKVVPTLRVVRQMFAKQPKFEFNHVINNDDVACLRVTSMGPPIASQFDGDYLGVRETMTFRAVPDALAVVAPPARKR I
Specific function: Unknown
COG id: COG1597
COG function: function code IR; Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34475; Mature: 34475
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAVLIVNPTATATTPAGRDLLAHALESRLQLTVEHTNHRGHGTELGQAAVADGVDLVVV CEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHCCCEEEEE HGGDGTVSAVVNGMLGRPGTTPVRPVPAVAVVPGGSANVLARALGISADPIAATNQLIQL ECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHH LDDYGRHQQWRRIGLIDCGERWAVFNAGMGVDAEVVAAVEAERDKGGKVTAWRYIRAAVR HHHHCCHHHHHEECEEECCCCEEEEECCCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHH AVLACTRREPALTLQLPNRDPITGVHFVFVSNSSPWTYANNRPVWTNPDCRFESGLGVFA HHHHHCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCEECCCCCCCCCCCCEEE TTSMKVVPTLRVVRQMFAKQPKFEFNHVINNDDVACLRVTSMGPPIASQFDGDYLGVRET ECCEEHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEECCCCCCHHHCCCCEECHHHE MTFRAVPDALAVVAPPARKRI EEEEECCCHHEEECCCHHCCC >Mature Secondary Structure MRAVLIVNPTATATTPAGRDLLAHALESRLQLTVEHTNHRGHGTELGQAAVADGVDLVVV CEEEEEECCCCCCCCCCCHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHCCCEEEEE HGGDGTVSAVVNGMLGRPGTTPVRPVPAVAVVPGGSANVLARALGISADPIAATNQLIQL ECCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHH LDDYGRHQQWRRIGLIDCGERWAVFNAGMGVDAEVVAAVEAERDKGGKVTAWRYIRAAVR HHHHCCHHHHHEECEEECCCCEEEEECCCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHH AVLACTRREPALTLQLPNRDPITGVHFVFVSNSSPWTYANNRPVWTNPDCRFESGLGVFA HHHHHCCCCCEEEEECCCCCCCCEEEEEEEECCCCEEECCCCCEECCCCCCCCCCCCEEE TTSMKVVPTLRVVRQMFAKQPKFEFNHVINNDDVACLRVTSMGPPIASQFDGDYLGVRET ECCEEHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEEEEECCCCCCHHHCCCCEECHHHE MTFRAVPDALAVVAPPARKRI EEEEECCCHHEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA