Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

Click here to switch to the map view.

The map label for this gene is gpmA [H]

Identifier: 148824413

GI number: 148824413

Start: 3603336

End: 3604022

Strand: Direct

Name: gpmA [H]

Synonym: TBFG_13240

Alternate gene names: 148824413

Gene position: 3603336-3604022 (Clockwise)

Preceding gene: 148824411

Following gene: 148824414

Centisome position: 81.44

GC content: 64.77

Gene sequence:

>687_bases
GTGTCATCCTGGCATGCTGCTCGCACAGTGGTTCGGGCGACAGGCCTAGGATGTCGTCGGGCACAATCTGTCGGTATGGG
CGTGCGCAACCACCGATTGCTACTGCTCCGCCACGGCGAGACCGCTTGGTCGACGCTGGGCCGGCACACCGGCGGTACCG
AGGTCGAGCTGACCGATACCGGGCGAACGCAGGCAGAGCTGGCTGGTCAGCTGCTGGGTGAACTCGAACTTGACGACCCG
ATTGTCATCTGTAGCCCGCGTCGACGGACGTTGGATACTGCCAAGTTGGCCGGCCTGACGGTGAATGAGGTAACTGGGCT
GCTCGCCGAATGGGATTACGGTTCCTATGAGGGCCTTACGACGCCGCAGATCCGGGAATCCGAACCCGATTGGCTGGTGT
GGACGCACGGCTGCCCAGCTGGAGAAAGCGTCGCACAGGTAAACGATCGCGCTGACAGCGCCGTCGCGCTGGCCCTGGAG
CACATGTCCTCACGCGACGTGTTGTTTGTCAGCCATGGCCACTTCTCCCGCGCGGTGATCACGCGCTGGGTCCAGCTACC
GCTCGCCGAAGGCAGCCGTTTCGCGATGCCCACCGCCTCGATCGGGATCTGCGGGTTCGAGCACGGCGTGCGTCAGCTCG
CCGTGCTCGGGTTGACCGGTCATCCGCAGCCGATCGCAGCCGGGTGA

Upstream 100 bases:

>100_bases
CTAGCACCCGGGTATCAGTCATAGGCGCCGCTCTCCCCCGCAAGCGGCAGGGACCCCCACCTCATCGTGCTCTCCCTTCG
TCGTCGCCCGCGCAGTCACA

Downstream 100 bases:

>100_bases
GCGCACACGTGGCAACCTTGCACCCAGAACCACCGTTCGCACTGTGCGGACCAAGAGGCACCCTGATTGCCCGCGGGGTG
CGGACACGATACTGCGACGT

Product: acid phosphatase

Products: NA

Alternate protein names: BPG-dependent PGAM; PGAM; Phosphoglyceromutase; dPGM [H]

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDP
IVICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLTTPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALE
HMSSRDVLFVSHGHFSRAVITRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG

Sequences:

>Translated_228_residues
MSSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDP
IVICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLTTPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALE
HMSSRDVLFVSHGHFSRAVITRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG
>Mature_227_residues
SSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDTGRTQAELAGQLLGELELDDPI
VICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLTTPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALEH
MSSRDVLFVSHGHFSRAVITRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG

Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322896, Length=184, Percent_Identity=30.4347826086957, Blast_Score=76, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR005952 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 24589; Mature: 24458

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS01121 CASPASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDT
CCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCEEEEECC
GRTQAELAGQLLGELELDDPIVICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLT
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCC
TPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALEHMSSRDVLFVSHGHFSRAVI
CCCCCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHH
TRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG
HHHHHCCCCCCCEEECCCCCEEEECHHHHHHEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SSWHAARTVVRATGLGCRRAQSVGMGVRNHRLLLLRHGETAWSTLGRHTGGTEVELTDT
CCHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCEEEEECC
GRTQAELAGQLLGELELDDPIVICSPRRRTLDTAKLAGLTVNEVTGLLAEWDYGSYEGLT
CCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCC
TPQIRESEPDWLVWTHGCPAGESVAQVNDRADSAVALALEHMSSRDVLFVSHGHFSRAVI
CCCCCCCCCCEEEEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHH
TRWVQLPLAEGSRFAMPTASIGICGFEHGVRQLAVLGLTGHPQPIAAG
HHHHHCCCCCCCEEECCCCCEEEECHHHHHHEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA