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The map label for this gene is IS1086 [H]

Identifier: 148824384

GI number: 148824384

Start: 3569076

End: 3570260

Strand: Reverse

Name: IS1086 [H]

Synonym: TBFG_13211

Alternate gene names: 148824384

Gene position: 3570260-3569076 (Counterclockwise)

Preceding gene: 148824386

Following gene: 148824383

Centisome position: 80.69

GC content: 63.63

Gene sequence:

>1185_bases
ATGGAGCTGCGGGCTCGGGGCTGGTCCATCTCGGCAGCGGGTCGTGAAGTTGGAGTATCCCGGACTGCAGCAAACAATTG
GGCGCGGGGATACAAGACCTATCGGCGTGGCGAAGCCGTCGGATTCGTGCCCGCGCTCGATCGTTTGGCTGTGCGCCAAA
TTAGTAGTCGCTATCTGTCCGAGGAGGAGCGGATCAACATCGCCGATCTGCGCCGCTCGGGCCTAAGTATCCGCAAGATC
GCCGACCAGCTCGGACGGGCACCCTCGACGGTGTCGCGGGAGCTACGCCGCAACAGTCGCCGCGATGGCCAGTACCGGCC
GTTCGAAGCGCATCGCTGGGCGGTTCAACGCCGAGTCCGCCGTCACCGGCGTCGGATCGACAAAAACCCCGACCTTTGTG
AGCTGATCGCCGAGCTGCTGGCCCAGCGGTGGAGCCCGCAACAGATCGCCCGGCATCTGCGACGGAAATACCCCGATGAC
CGGTCGATGTGGTTGTGCCACGAAAGCATCTATCAGGCCGTCTATCAGCCTCAATCACGATTGATCCGGCCGCCGCAGGT
CAAGTCGCCACACCGTGGCCCTCTGCGCACGGGACGAACTCATCGCCGCGCCCATCTGCGTCCTGGCCGTCGCCGCCCGC
GCTTCGCCCAGCCGATGTTGTCGATTCACCAGCGGCCGTTCGATCCCGCCGACCGCTCCGAGCCTGGCCACTGGGAAGGA
GATCTCATCGTTGGTAAGAACCAGGGCTCGGCGATTGGCACCCTCGTCGAGCGACAGACACGTCTGATTCGGCTGCTGCA
CCTGCCGACCCACGACGCTTACTGCCTGCGCATCGCGATCACCGAGACCATGAGCGACTTGCCGGTGACGCTGGTCCGGT
CCATCACGTGGGATCAGGGCATCGAAATGGCCCGGCACATCGACATCACCGCCGACCTGGGCGCGCCGGTCTACTTTTGC
GACTCCCGCTCACCGTGGCAGCGAGCCAGCAACGAGAACTCCAACGGTCTGCTACGGCAATACTTCCCAAAGGGCACCAG
CCTCAGCACCTACACGCCCGACCATCTGCGGGCTGTCGAATACGAGATCAATAACCGACCCCGCCAAGTCCTCGGGCACC
GCAGTCCCGCTGAACTTTTCACCGCGCTGCTAACCTCACCAGACCATCAATTGTTGCGACGTTGA

Upstream 100 bases:

>100_bases
CGCAACACATCTCTAGGTTCTGGAGGTTGTGTTGTCATCGTCTCGTCGCGTGAAAAAGGGTCCGGGCCGGCGCCCACAGT
CGGCCAAGCGTCAACGGTTT

Downstream 100 bases:

>100_bases
CTAGAACCCACCTTGCCGCGCTCTGGTCAGTATTCAGTTGCCGCCGACAGGAAGAGGGTATGTGATGCAGTGACCACCTC
GGCAGACCCCACCAGCGTTC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MELRARGWSISAAGREVGVSRTAANNWARGYKTYRRGEAVGFVPALDRLAVRQISSRYLSEEERINIADLRRSGLSIRKI
ADQLGRAPSTVSRELRRNSRRDGQYRPFEAHRWAVQRRVRRHRRRIDKNPDLCELIAELLAQRWSPQQIARHLRRKYPDD
RSMWLCHESIYQAVYQPQSRLIRPPQVKSPHRGPLRTGRTHRRAHLRPGRRRPRFAQPMLSIHQRPFDPADRSEPGHWEG
DLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVTLVRSITWDQGIEMARHIDITADLGAPVYFC
DSRSPWQRASNENSNGLLRQYFPKGTSLSTYTPDHLRAVEYEINNRPRQVLGHRSPAELFTALLTSPDHQLLRR

Sequences:

>Translated_394_residues
MELRARGWSISAAGREVGVSRTAANNWARGYKTYRRGEAVGFVPALDRLAVRQISSRYLSEEERINIADLRRSGLSIRKI
ADQLGRAPSTVSRELRRNSRRDGQYRPFEAHRWAVQRRVRRHRRRIDKNPDLCELIAELLAQRWSPQQIARHLRRKYPDD
RSMWLCHESIYQAVYQPQSRLIRPPQVKSPHRGPLRTGRTHRRAHLRPGRRRPRFAQPMLSIHQRPFDPADRSEPGHWEG
DLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVTLVRSITWDQGIEMARHIDITADLGAPVYFC
DSRSPWQRASNENSNGLLRQYFPKGTSLSTYTPDHLRAVEYEINNRPRQVLGHRSPAELFTALLTSPDHQLLRR
>Mature_394_residues
MELRARGWSISAAGREVGVSRTAANNWARGYKTYRRGEAVGFVPALDRLAVRQISSRYLSEEERINIADLRRSGLSIRKI
ADQLGRAPSTVSRELRRNSRRDGQYRPFEAHRWAVQRRVRRHRRRIDKNPDLCELIAELLAQRWSPQQIARHLRRKYPDD
RSMWLCHESIYQAVYQPQSRLIRPPQVKSPHRGPLRTGRTHRRAHLRPGRRRPRFAQPMLSIHQRPFDPADRSEPGHWEG
DLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVTLVRSITWDQGIEMARHIDITADLGAPVYFC
DSRSPWQRASNENSNGLLRQYFPKGTSLSTYTPDHLRAVEYEINNRPRQVLGHRSPAELFTALLTSPDHQLLRR

Specific function: Required for the transposition of the insertion element (Potential) [H]

COG id: COG2826

COG function: function code L; Transposase and inactivated derivatives, IS30 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790736, Length=334, Percent_Identity=39.2215568862275, Blast_Score=214, Evalue=7e-57,
Organism=Escherichia coli, GI1787671, Length=334, Percent_Identity=39.2215568862275, Blast_Score=214, Evalue=7e-57,
Organism=Escherichia coli, GI1786450, Length=334, Percent_Identity=38.9221556886228, Blast_Score=213, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR001598 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 45750; Mature: 45750

Theoretical pI: Translated: 11.67; Mature: 11.67

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRARGWSISAAGREVGVSRTAANNWARGYKTYRRGEAVGFVPALDRLAVRQISSRYLS
CCCCCCCCEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHC
EEERINIADLRRSGLSIRKIADQLGRAPSTVSRELRRNSRRDGQYRPFEAHRWAVQRRVR
HHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
RHRRRIDKNPDLCELIAELLAQRWSPQQIARHLRRKYPDDRSMWLCHESIYQAVYQPQSR
HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCHHH
LIRPPQVKSPHRGPLRTGRTHRRAHLRPGRRRPRFAQPMLSIHQRPFDPADRSEPGHWEG
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
DLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVTLVRSITWDQG
CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCHHHHHHHHHHHHH
IEMARHIDITADLGAPVYFCDSRSPWQRASNENSNGLLRQYFPKGTSLSTYTPDHLRAVE
HHHHHHEEEEECCCCCEEEECCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHEEEE
YEINNRPRQVLGHRSPAELFTALLTSPDHQLLRR
EHHCCCHHHHHCCCCHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MELRARGWSISAAGREVGVSRTAANNWARGYKTYRRGEAVGFVPALDRLAVRQISSRYLS
CCCCCCCCEEECCCHHHCCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHC
EEERINIADLRRSGLSIRKIADQLGRAPSTVSRELRRNSRRDGQYRPFEAHRWAVQRRVR
HHHCCCHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
RHRRRIDKNPDLCELIAELLAQRWSPQQIARHLRRKYPDDRSMWLCHESIYQAVYQPQSR
HHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCHHH
LIRPPQVKSPHRGPLRTGRTHRRAHLRPGRRRPRFAQPMLSIHQRPFDPADRSEPGHWEG
CCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
DLIVGKNQGSAIGTLVERQTRLIRLLHLPTHDAYCLRIAITETMSDLPVTLVRSITWDQG
CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHCHHHHHHHHHHHHH
IEMARHIDITADLGAPVYFCDSRSPWQRASNENSNGLLRQYFPKGTSLSTYTPDHLRAVE
HHHHHHEEEEECCCCCEEEECCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCHHHHEEEE
YEINNRPRQVLGHRSPAELFTALLTSPDHQLLRR
EHHCCCHHHHHCCCCHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1334071 [H]