| Definition | Mycobacterium tuberculosis F11, complete genome. |
|---|---|
| Accession | NC_009565 |
| Length | 4,424,435 |
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The map label for this gene is 148824332
Identifier: 148824332
GI number: 148824332
Start: 3517318
End: 3518406
Strand: Direct
Name: 148824332
Synonym: TBFG_13159
Alternate gene names: NA
Gene position: 3517318-3518406 (Clockwise)
Preceding gene: 148824331
Following gene: 148824333
Centisome position: 79.5
GC content: 61.89
Gene sequence:
>1089_bases ATGAGCGACCCGTTCACCATCGCAACCAAACACTGGCACCGACTGCACGACAGCCGGATCCAGTGCGATGTATGTCCACG CGCATGCAAACTTCACGAGGGACAGCGTGGCCTGTGTTTCGTCCGCGGCCGATTTGACGATCAAGTGAAGCTCACCAGCT ACGGACGCTCTAGCGGATTCTGTGTCGATCCGATCGAGAAAAAGCCGCTCAACCACTTCTTGCCAGGTTCGGCGACGCTG TCTTTCGGCACCGCCGGGTGCAACCTGGCGTGCAAGTTCTGCCAGAACTGGGATATCTCCAAGTCCCGCGAGATCGACGT CCTGGCCAGTCGGGCGGCCCCGGCCGACATCGCCCGGACCGCACACGAATTGGGTTGCCGCAGCGTGGCATTCACCTACA ACGACCCAACGATCTTCTGGGAGTATGCCGCCGATGTAGCCGACGCCTGCCACGACCAGGGAATCAAAGCCGTCGCGGTG ACGGCCGGGTACATGTGTCCTGAGCCCCGCGCGGAATTCTACCGGCGTGTCGACGCCGCCAACGTCGACCTAAAGGCATT CACCGAAGACTTTTATCGCAAGGTTTGCGTCAGTCACCTGCGCAACGTCCTGGACACCCTGGCCTACCTGCGGCACCAGA CGAATGTGTGGTTGGAGATCACCACCCTGCTGATTCCCGGACGTAACGACAGCGACGCGGAAGTCGCTGCCGAATGCAGA TGGATCCGCGAAAACCTGGGCGTCGACGTGCCGGTGCATTTCACCGCGTTCCATCCCGACTACAAGATGATGGACACCCC GGCTACACCAACCGCCACATTGACCCGAGCCCGCGAGATCGGCATTGGCGAAGGCCTGCGCTTCGTCTACACCGGAAACG TTCACGATGCCGTGGGTGGCAGCACCTCGTGCCCAGGCTGCCGGGCAACGGTGATCGTTCGCGACTGGTATTCGATACGA CATTACGCCCTCACCGAGGACGGCCGCTGCCAAGCATGCGGCTATCAGATGCCTGGCGTGTACGACGGACCGGCCGGACA CTGGGGCCAGCGCCGGCTGCCCTTGCTGACCAGCTTGTCCCGGATGTGA
Upstream 100 bases:
>100_bases GCCGGCCCACACGGGGGCAGCGCCGTTGCAACCAACGGTCTGTTGCACGACGAGGTGCTGACACGGCTCAACGCCGGGTA ACCTGGCGCTCGAGAGCGCC
Downstream 100 bases:
>100_bases ACAACTTAACAAGCACCCCTATCTTACTCCGGAGTAAGATAGGGTGGTCCGCTATCACCCCGATGACCGAGGCTGCCGTA TGACCAACACCACCTCTGCT
Product: pyruvate formate lyase activating protein pflA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MSDPFTIATKHWHRLHDSRIQCDVCPRACKLHEGQRGLCFVRGRFDDQVKLTSYGRSSGFCVDPIEKKPLNHFLPGSATL SFGTAGCNLACKFCQNWDISKSREIDVLASRAAPADIARTAHELGCRSVAFTYNDPTIFWEYAADVADACHDQGIKAVAV TAGYMCPEPRAEFYRRVDAANVDLKAFTEDFYRKVCVSHLRNVLDTLAYLRHQTNVWLEITTLLIPGRNDSDAEVAAECR WIRENLGVDVPVHFTAFHPDYKMMDTPATPTATLTRAREIGIGEGLRFVYTGNVHDAVGGSTSCPGCRATVIVRDWYSIR HYALTEDGRCQACGYQMPGVYDGPAGHWGQRRLPLLTSLSRM
Sequences:
>Translated_362_residues MSDPFTIATKHWHRLHDSRIQCDVCPRACKLHEGQRGLCFVRGRFDDQVKLTSYGRSSGFCVDPIEKKPLNHFLPGSATL SFGTAGCNLACKFCQNWDISKSREIDVLASRAAPADIARTAHELGCRSVAFTYNDPTIFWEYAADVADACHDQGIKAVAV TAGYMCPEPRAEFYRRVDAANVDLKAFTEDFYRKVCVSHLRNVLDTLAYLRHQTNVWLEITTLLIPGRNDSDAEVAAECR WIRENLGVDVPVHFTAFHPDYKMMDTPATPTATLTRAREIGIGEGLRFVYTGNVHDAVGGSTSCPGCRATVIVRDWYSIR HYALTEDGRCQACGYQMPGVYDGPAGHWGQRRLPLLTSLSRM >Mature_361_residues SDPFTIATKHWHRLHDSRIQCDVCPRACKLHEGQRGLCFVRGRFDDQVKLTSYGRSSGFCVDPIEKKPLNHFLPGSATLS FGTAGCNLACKFCQNWDISKSREIDVLASRAAPADIARTAHELGCRSVAFTYNDPTIFWEYAADVADACHDQGIKAVAVT AGYMCPEPRAEFYRRVDAANVDLKAFTEDFYRKVCVSHLRNVLDTLAYLRHQTNVWLEITTLLIPGRNDSDAEVAAECRW IRENLGVDVPVHFTAFHPDYKMMDTPATPTATLTRAREIGIGEGLRFVYTGNVHDAVGGSTSCPGCRATVIVRDWYSIRH YALTEDGRCQACGYQMPGVYDGPAGHWGQRRLPLLTSLSRM
Specific function: Unknown
COG id: COG1180
COG function: function code O; Pyruvate-formate lyase-activating enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR016431 - InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 40433; Mature: 40302
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPFTIATKHWHRLHDSRIQCDVCPRACKLHEGQRGLCFVRGRFDDQVKLTSYGRSSGF CCCCEEEHHHHHHHHCCCCEEEECCCHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCC CVDPIEKKPLNHFLPGSATLSFGTAGCNLACKFCQNWDISKSREIDVLASRAAPADIART EECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHH AHELGCRSVAFTYNDPTIFWEYAADVADACHDQGIKAVAVTAGYMCPEPRAEFYRRVDAA HHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCC NVDLKAFTEDFYRKVCVSHLRNVLDTLAYLRHQTNVWLEITTLLIPGRNDSDAEVAAECR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHH WIRENLGVDVPVHFTAFHPDYKMMDTPATPTATLTRAREIGIGEGLRFVYTGNVHDAVGG HHHHHCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHCCCC STSCPGCRATVIVRDWYSIRHYALTEDGRCQACGYQMPGVYDGPAGHWGQRRLPLLTSLS CCCCCCCEEEEEEECCHHHEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH RM CC >Mature Secondary Structure SDPFTIATKHWHRLHDSRIQCDVCPRACKLHEGQRGLCFVRGRFDDQVKLTSYGRSSGF CCCEEEHHHHHHHHCCCCEEEECCCHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCC CVDPIEKKPLNHFLPGSATLSFGTAGCNLACKFCQNWDISKSREIDVLASRAAPADIART EECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHH AHELGCRSVAFTYNDPTIFWEYAADVADACHDQGIKAVAVTAGYMCPEPRAEFYRRVDAA HHHCCCCEEEEEECCCEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCC NVDLKAFTEDFYRKVCVSHLRNVLDTLAYLRHQTNVWLEITTLLIPGRNDSDAEVAAECR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHH WIRENLGVDVPVHFTAFHPDYKMMDTPATPTATLTRAREIGIGEGLRFVYTGNVHDAVGG HHHHHCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHCCCC STSCPGCRATVIVRDWYSIRHYALTEDGRCQACGYQMPGVYDGPAGHWGQRRLPLLTSLS CCCCCCCEEEEEEECCHHHEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH RM CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]